eoPredData
This is the development version of eoPredData; for the stable release version, see eoPredData.
ExperimentHub package containing model data for predicting preeclampsia status for based on plcaental DNA methylation profile
Bioconductor version: Development (3.23)
Provides access to eoPred pretrained model hosted on ExperimentHub. Model was trained on placental DNA methylation preeclampsia samples using mixOmics splsda. There are two resources: 1. the model object, and 2. a testing data set used to demonstrate the function.
Author: Iciar Boyano [aut], Victor Yuan [aut, cre]
Maintainer: Victor Yuan <victor.2wy at gmail.com>
citation("eoPredData")):
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("eoPredData")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("eoPredData")| eoPredData | HTML | R Script |
| Reference Manual | ||
| LICENSE | Text |
Details
| biocViews | ExperimentData, ExperimentHub, GEO, Homo_sapiens_Data, MethylationArrayData, Tissue |
| Version | 1.3.0 |
| License | MIT + file LICENSE |
| Depends | ExperimentHub |
| Imports | |
| System Requirements | |
| URL | https://github.com/wvictor14/eoPredData |
| Bug Reports | https://github.com/wvictor14/eoPredData/issues |
See More
| Suggests | BiocStyle, knitr, rmarkdown, RefManageR, planet, mixOmics |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | eoPredData_1.3.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/eoPredData |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/eoPredData |
| Package Short Url | https://bioconductor.org/packages/eoPredData/ |
| Package Downloads Report | Download Stats |