ExperimentHub
This is the development version of ExperimentHub; for the stable release version, see ExperimentHub.
Client to access ExperimentHub resources
Bioconductor version: Development (3.23)
This package provides a client for the Bioconductor ExperimentHub web resource. ExperimentHub provides a central location where curated data from experiments, publications or training courses can be accessed. Each resource has associated metadata, tags and date of modification. The client creates and manages a local cache of files retrieved enabling quick and reproducible access.
Author: Bioconductor Package Maintainer [cre], Martin Morgan [aut], Marc Carlson [ctb], Dan Tenenbaum [ctb], Sonali Arora [ctb], Valerie Oberchain [ctb], Kayla Morrell [ctb], Lori Shepherd [aut]
Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>
citation("ExperimentHub")):
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("ExperimentHub")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | DataImport, GUI, Infrastructure, Software, ThirdPartyClient |
| Version | 3.1.0 |
| In Bioconductor since | BioC 3.4 (R-3.3) (9 years) |
| License | Artistic-2.0 |
| Depends | methods, BiocGenerics(>= 0.15.10), AnnotationHub(>= 3.99.3), BiocFileCache(>= 2.99.3) |
| Imports | utils, S4Vectors, BiocManager, rappdirs |
| System Requirements | |
| URL | https://github.com/Bioconductor/ExperimentHub |
| Bug Reports | https://github.com/Bioconductor/ExperimentHub/issues |
See More
| Suggests | knitr, BiocStyle, rmarkdown, HubPub, GenomicAlignments |
| Linking To | |
| Enhances | ExperimentHubData |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/ExperimentHub |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/ExperimentHub |
| Package Short Url | https://bioconductor.org/packages/ExperimentHub/ |
| Package Downloads Report | Download Stats |