Uses of Interface
net.imglib2.Typed
Packages that use Typed
Package
Description
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Uses of Typed in net.imglib2
Subinterfaces of Typed in net.imglib2Modifier and TypeInterfaceDescriptioninterfaceCursor<T>A Cursor iterates over a set of Localizable elements, for example the image values at the (integer) pixel positions of an image.interfaceAnIterableRealIntervalwhose elements are located at integer coordinates.interfacef:Rn∈[0,s]→TinterfaceCombination ofLocalizableandSamplerinterfaces.interfaceRandomAccess<T>interfacef:Zn→Tinterfacef:{x∈Zn|[min,max]→T}interfaceRealCursor<T>A RealCursor iterates over a set of RealLocalizable elements, for example intensity values sampled at a finite set of arbitrary real positions.interfaceCombination ofRealLocalizableandSamplerinterfaces.interfaceinterfacef:Rn→Tinterfacef:{x∈Rn|[min,max]→T}interfaceSampler<T>TheSamplerinterface provides access to a value whose type is specified by the generic parameter T.Classes in net.imglib2 that implement TypedModifier and TypeClassDescriptionclassAbstract implementation ofCursor.classAbstract implementation ofCursor.classAbstract base class for localizingCursors.classAbstract base class for localizingCursors.classKDTree<T>final classclassKDTreeNode<T>Proxy for a node in a KDTree.classPointSample<T>A simple default implementation ofRandomAccessthat can be used to combine a real location and a sample instance, e.g.classA list of data samples at explicitinteger coordinates.classclassA simple default implementation ofRealRandomAccessthat can be used to combine a real location and a sample value, e.g.classA list of data samples at explicitreal coordinates.class -
Uses of Typed in net.imglib2.converter
Classes in net.imglib2.converter that implement TypedModifier and TypeClassDescriptionclassTODOclassTODOclassAbstractConvertedIterableRandomAccessibleInterval<A, B, S extends IterableInterval<A>>TODOclassTODOclassTODOclassTODOclassclassTODOclassTODOclassTODO -
Uses of Typed in net.imglib2.converter.read
Classes in net.imglib2.converter.read that implement TypedModifier and TypeClassDescriptionclassBiConvertedCursor<A,B, C> TODOclassBiConvertedIterableInterval<A,B, C> TODOclassTODOfinal classBiConvertedRandomAccess<A,B, C> TODOclassBiConvertedRandomAccessible<A,B, C> TODOclassTODOclassBiConvertedRealCursor<A,B, C> TODOfinal classBiConvertedRealRandomAccess<A,B, C> TODOclassTODOclassTODOclassConvertedCursor<A,B> TODOclassTODOclassTODOfinal classTODOclassTODOclassTODOclassConvertedRealCursor<A,B> TODOfinal classTODOclassTODOclassTODO -
Uses of Typed in net.imglib2.converter.readwrite
Classes in net.imglib2.converter.readwrite that implement TypedModifier and TypeClassDescriptionprivate static classclassWriteConvertedCursor<A,B> TODOclassTODOclassWriteConvertedIterableRandomAccessibleInterval<A, B, S extends RandomAccessible<A> & IterableInterval<A>>TODOclassTODOfinal classTODOclassTODOclassTODOclassTODO -
Uses of Typed in net.imglib2.display.projector.sampler
Subinterfaces of Typed in net.imglib2.display.projector.samplerModifier and TypeInterfaceDescriptioninterfaceprovides samples from a projected (SamplingProjector2D) dimension.Classes in net.imglib2.display.projector.sampler that implement TypedModifier and TypeClassDescriptionclassallows stepwise access to a preselected projected dimension.classProvides access to a set of predefined positions of a projected dimension -
Uses of Typed in net.imglib2.display.screenimage.awt
Classes in net.imglib2.display.screenimage.awt that implement TypedModifier and TypeClassDescriptionclassclassArrayImgAWTScreenImage<T extends NativeType<T>, A extends DataAccess>AnAWTScreenImagethat is anArrayImg.classAAWTScreenImagethat is anArrayImg<ByteType, ByteArray>.classAAWTScreenImagethat is anArrayImg<DoubleType, DoubleArray>.classAAWTScreenImagethat is anArrayImg<FloatType, FloatArray>.classAAWTScreenImagethat is anArrayImg<ShortType, ShortArray>.classAAWTScreenImagethat is anArrayImg<ShortType, ShortArray>.classAAWTScreenImagethat is anArrayImg<UnsignedByteType, ByteArray>.classAAWTScreenImagethat is anArrayImg<ShortType, ShortArray>.classAAWTScreenImagethat is anArrayImg<UnsignedShortType, ShortArray>. -
Uses of Typed in net.imglib2.histogram
Classes in net.imglib2.histogram that implement TypedModifier and TypeClassDescriptionclassThis class represents an n-dimensional set of counters.classHistogram1d<T>A Histogram1d is a histogram that tracks up to four kinds of values: 1) values in the center of the distribution 2) values to the left of the center of the distribution (lower tail) 3) values to the right of the center of the distribution (upper tail) 4) values outside the other areasclassHistogramNd<T>A HistogramNd is an n-dimensional histogram that tracks up to four kinds of values: 1) values in the center of the distribution 2) values to the left of the center of the distribution (lower tail) 3) values to the right of the center of the distribution (upper tail) 4) values outside the other areas -
Uses of Typed in net.imglib2.img
Subinterfaces of Typed in net.imglib2.imgModifier and TypeInterfaceDescriptioninterfaceImg<T>AnImgis aRandomAccessibleIntervalthat has its min at 0n and its max positive.interfaceTODOClasses in net.imglib2.img that implement TypedModifier and TypeClassDescriptionclassAbstractImg<T>TODOclassAbstractNativeImg<T extends NativeType<T>, A>TODOclassAllows aRandomAccessibleIntervalto be treated as anImg. -
Uses of Typed in net.imglib2.img.array
Classes in net.imglib2.img.array that implement TypedModifier and TypeClassDescriptionclassAbstractArrayCursor<T extends NativeType<T>>classAbstractArrayLocalizingCursor<T extends NativeType<T>>final classArrayCursor<T extends NativeType<T>>classArrayImg<T extends NativeType<T>, A extends DataAccess>ThisImgstores an image in a single linear array of basic types.final classArrayLocalizingCursor<T extends NativeType<T>>(package private) classArrayLocalizingSpliterator<T extends NativeType<T>>LocalizableSpliterator for ArrayImg.final classArrayLocalizingSubIntervalCursor<T extends NativeType<T>>LocalizingAbstractArrayLocalizingCursoron anArrayImg.classArrayRandomAccess<T extends NativeType<T>>RandomAccesson anArrayImg.(package private) classArraySpliterator<T extends NativeType<T>>LocalizableSpliterator for ArrayImg.final classArraySubIntervalCursor<T extends NativeType<T>> -
Uses of Typed in net.imglib2.img.cell
Classes in net.imglib2.img.cell that implement TypedModifier and TypeClassDescriptionclassAbstractCellImg<T extends NativeType<T>, A extends DataAccess, C extends Cell<A>, I extends RandomAccessible<C> & IterableInterval<C>>Abstract superclass forImgtypes that divide their underlying data into cells.classCellCursor<T extends NativeType<T>, C extends Cell<?>>Cursoron aAbstractCellImg.classprivate classclassCellImg<T extends NativeType<T>, A extends DataAccess>classCellLocalizingCursor<T extends NativeType<T>, C extends Cell<?>>LocalizingCursoron aAbstractCellImg.classCellRandomAccess<T extends NativeType<T>, C extends Cell<?>>RandomAccesson aAbstractCellImg.(package private) classCellSpliterator<T extends NativeType<T>, C extends Cell<?>>LocalizableSpliterator forCellImg.classLazyCellImg<T extends NativeType<T>, A extends DataAccess>AAbstractCellImgthat obtains its Cells lazily when they are accessed.static final classLazyCellImg.LazyCells<T extends Cell<?>> -
Uses of Typed in net.imglib2.img.list
Classes in net.imglib2.img.list that implement TypedModifier and TypeClassDescriptionclassAbstract base class forImgthat store pixels in a single linear array (anArrayListor similar).In principle, the number of entities stored is limited toInteger.MAX_VALUE.classAbstract base class forImgthat store pixels in a single linear list addressed by a long.classclassclassfinal classListCursor<T>classListImg<T>final classclassRandomAccesson aListImg. -
Uses of Typed in net.imglib2.img.planar
Classes in net.imglib2.img.planar that implement TypedModifier and TypeClassDescriptionclassPlanarCursor<T extends NativeType<T>>Basic Iterator forPlanarContainersclassPlanarCursor1D<T extends NativeType<T>>Basic Iterator for 1dPlanarContainersclassPlanarCursor2D<T extends NativeType<T>>Basic Iterator for 2dPlanarContainersclassPlanarImg<T extends NativeType<T>, A extends ArrayDataAccess<A>>ANativeImgthat stores data in a list of primitive arrays, one per image plane.classPlanarLocalizingCursor<T extends NativeType<T>>Localizing Iterator for aPlanarContainersclassPlanarLocalizingCursor1D<T extends NativeType<T>>TODOclassPlanarLocalizingCursor2D<T extends NativeType<T>>TODOclassPlanarPlaneSubsetCursor<T extends NativeType<T>>Basic Iterator forPlanarContainersclassPlanarPlaneSubsetLocalizingCursor<T extends NativeType<T>>Cursor optimized for one plane in an PlanarImg.classPlanarRandomAccess<T extends NativeType<T>>RandomAccesson aPlanarImg.classPlanarRandomAccess1D<T extends NativeType<T>>RandomAccessfor a 1-dimensionalPlanarImg.(package private) classPlanarSpliterator<T extends NativeType<T>>LocalizableSpliterator forPlanarImg. -
Uses of Typed in net.imglib2.img.sparse
Classes in net.imglib2.img.sparse that implement TypedModifier and TypeClassDescriptionfinal classNtreeCursor<T extends NativeType<T>>final classNtreeImg<T extends NativeType<T>, A extends NtreeAccess<?,A>> final classNtreeRandomAccess<T extends NativeType<T>> -
Uses of Typed in net.imglib2.interpolation
Classes in net.imglib2.interpolation that implement TypedModifier and TypeClassDescriptionfinal classInterpolant<T,F> ARealRandomAccessiblethat is generated through interpolation. -
Uses of Typed in net.imglib2.interpolation.neighborsearch
Classes in net.imglib2.interpolation.neighborsearch that implement TypedModifier and TypeClassDescriptionclassInverseDistanceWeightingInterpolator<T extends RealType<T>>RealRandomAccessto aKNearestNeighborSearchwhose sample value is generated by weighting the k nearest neighbors of a query real coordinate by their inverse distance to an arbitrary power p.classNearest-neighbor interpolation implemented byNearestNeighborSearch. -
Uses of Typed in net.imglib2.interpolation.randomaccess
Classes in net.imglib2.interpolation.randomaccess that implement TypedModifier and TypeClassDescriptionclassClampingNLinearInterpolatorRealType<T extends RealType<T>>N-linear interpolator forRealTypevalues with overflow check.classN-linear interpolator for volatile ARGB values with overflow check.classClampingNLinearInterpolatorVolatileRealType<R extends RealType<R>, T extends AbstractVolatileRealType<R,T>> N-linear interpolator forRealTypevalues with overflow check.classRealRandomAccessto aRandomAccessby nearest floor interpolation (i.e., the value is sampled at floor(x)).classLanczosInterpolator<T extends RealType<T>>n-dimensional double-based Lanczos InterpolationclassRealRandomAccessto aRandomAccessby nearest neighbor interpolation.classNLinearInterpolator<T extends NumericType<T>>Performs multi-linear interpolation.classNLinearInterpolator1D<T extends NumericType<T>>classNLinearInterpolator2D<T extends NumericType<T>>classNLinearInterpolator3D<T extends NumericType<T>>classN-linear interpolator for ARGB values with overflow check. -
Uses of Typed in net.imglib2.interpolation.stack
Classes in net.imglib2.interpolation.stack that implement TypedModifier and TypeClassDescriptionclassLinearRealRandomAccessibleStackInterpolator<T extends NumericType<T>>A linear interpolator for stacks ofRealRandomAccessibles.classA nearest neighbor interpolator for stacks ofRealRandomAccessibles. -
Uses of Typed in net.imglib2.outofbounds
Subinterfaces of Typed in net.imglib2.outofboundsClasses in net.imglib2.outofbounds that implement TypedModifier and TypeClassDescriptionclassAbstract implementation of shared functions for mirroring out of bounds.classclassRepeat the boundary pixels.classfinal classCoordinates out of image bounds are mirrored between boundary coordinates.classOutOfBoundsMirrorExpWindowing<T extends NumericType<T>>Adds a exponential windowing to the mirrored content outside the Interval boundariesclassCoordinates out of image bounds are mirrored at boundary coordinates.classCoordinates out of image bounds are periodically repeated.classOutOfBoundsRandomValue<T extends RealType<T>>Return a random value in a certain range when outside of the Intervalfinal class -
Uses of Typed in net.imglib2.position
Classes in net.imglib2.position that implement TypedModifier and TypeClassDescriptionclassARandomAccessiblethat generates a function value for each position in discrete coordinate space by side-effect using aBiConsumer.classclassARealRandomAccessiblethat generates a function value for each position in real coordinate space by side-effect using aBiConsumer.classclassARandomAccessibleover the d-th position of discrete coordinate space.classclassARealRandomAccessibleover the d-th position of real coordinate space.class -
Uses of Typed in net.imglib2.stream
Subinterfaces of Typed in net.imglib2.streamModifier and TypeInterfaceDescriptioninterfaceASpliterator<T>which is Localizable similar to a Cursor.interfaceASpliterator<T>which is Localizable similar to a Cursor.Classes in net.imglib2.stream that implement TypedModifier and TypeClassDescriptionclassSpliterator implementation on top ofRealCursor.(package private) classWrapsLocalizableSpliteratorasSpliterator<LocalizableSampler<T>>.classSpliterator implementation on top ofRealCursor.(package private) classWrapsRealLocalizableSpliteratorasSpliterator<RealLocalizableSampler<T>>. -
Uses of Typed in net.imglib2.util
Classes in net.imglib2.util that implement TypedModifier and TypeClassDescriptionclassprivate classprivate static classA RandomAccess that returns its current position as value.private static classprivate static classA RandomAccess that returns its current position as value.private static class -
Uses of Typed in net.imglib2.view
Subinterfaces of Typed in net.imglib2.viewModifier and TypeInterfaceDescriptioninterfaceA view of a RandomAccessible which is related by a coordinateTransformto its source.Classes in net.imglib2.view that implement TypedModifier and TypeClassDescription(package private) classBundleView<T>ARandomAccessiblethat bundles the coordinates and value domain of aRandomAccessible<T>as aRandomAccessible<RandomAccess<T>>.(package private) classfinal classExtendedRandomAccessibleInterval<T, F extends RandomAccessibleInterval<T>>final classExtendedRealRandomAccessibleRealInterval<T, F extends RealRandomAccessibleRealInterval<T>>ImplementsRealRandomAccessiblefor aRealRandomAccessibleRealIntervalthrough anRealOutOfBoundsFactory.final classclass(package private) classFunctionView<A,B> (package private) classclassHyperSlice<T>classclassclassclassIntervalView<T>IntervalView is a view that putsIntervalboundaries on its sourceRandomAccessible.classGeneratesCursorsthat iterate aRandomAccessibleIntervalinFlatIterationOrder, that is: row by row, plane by plane, cube by cube, ...final classclassTODOfinal classACursorthat iterates anyRandomAccessibleIntervalby moving aRandomAccessin flat iteration order.classprivate final classclassRandomAccessiblePair<A,B> ARandomAccessibleover two independentRandomAccessibleswhose type is thePairof corresponding values at the same coordinates in either of the two sources.classclassclassStackView<T>A stack of n-dimensionalRandomAccessibleIntervals, forming a (n+1)-dimensionalRandomAccessibleInterval.static final classARandomAccesson aStackView.static classARandomAccesson aStackView.classSubsampleIntervalViewis a view that provides access to only every sdth value of a sourceRandomAccessibleInterval.classSubsampleViewis a view that provides access to only every sdth value of a sourceRandomAccessible.classfinal classclassfinal classTODO -
Uses of Typed in net.imglib2.view.composite
Classes in net.imglib2.view.composite that implement TypedModifier and TypeClassDescriptionclassCompositeIntervalView<T, C extends Composite<T>>classCompositeView<T, C extends Composite<T>>classclassInflateView<T>InflateViewexpands the composite elements of aRandomAccessibleofCompositeof T into the trailing dimension of an (n+1)-dimensionalRandomAccessibleof T.classclassclass -
Uses of Typed in net.imglib2.view.iteration
Subinterfaces of Typed in net.imglib2.view.iterationModifier and TypeInterfaceDescriptioninterfaceClasses in net.imglib2.view.iteration that implement TypedModifier and TypeClassDescriptionprivate classprivate classAnIterableIntervalon a slice of aSubIntervalIterable.private classclassWrap a cursor that runs on a hyperslice and apply coordinate transform on localize calls.