Deprecated API

Contents

• Methods
• Constructors

Deprecated Methods

Method	Description
net.imglib2.converter.read.BiConvertedIterableInterval.getConverter()	Use BiConvertedIterableInterval.getConverterSupplier() instead
net.imglib2.converter.read.BiConvertedIterableInterval.getDestinationType()	Use BiConvertedIterableInterval.getDestinationSupplier() instead.
net.imglib2.converter.read.BiConvertedIterableRealInterval.getConverter()	Use BiConvertedIterableRealInterval.getConverterSupplier() instead
net.imglib2.converter.read.BiConvertedIterableRealInterval.getDestinationType()	Use BiConvertedIterableRealInterval.getDestinationSupplier() instead.
net.imglib2.converter.read.BiConvertedRandomAccessible.getConverter()	Use BiConvertedRandomAccessible.getConverterSupplier() instead
net.imglib2.converter.read.BiConvertedRandomAccessible.getDestinationType()	Use BiConvertedRandomAccessible.getDestinationSupplier() instead.
net.imglib2.converter.read.BiConvertedRandomAccessibleInterval.getConverter()	Use BiConvertedRandomAccessibleInterval.getConverterSupplier() instead
net.imglib2.converter.read.BiConvertedRandomAccessibleInterval.getDestinationType()	Use BiConvertedRandomAccessibleInterval.getDestinationSupplier() instead.
net.imglib2.converter.read.BiConvertedRealRandomAccessible.getConverter()	Use BiConvertedRealRandomAccessible.getConverterSupplier() instead
net.imglib2.converter.read.BiConvertedRealRandomAccessible.getDestinationType()	Use BiConvertedRealRandomAccessible.getDestinationSupplier() instead.
net.imglib2.converter.read.BiConvertedRealRandomAccessibleRealInterval.getConverter()	Use BiConvertedRealRandomAccessibleRealInterval.getConverterSupplier() instead
net.imglib2.converter.read.BiConvertedRealRandomAccessibleRealInterval.getDestinationType()	Use BiConvertedRealRandomAccessibleRealInterval.getDestinationSupplier() instead.
net.imglib2.converter.read.ConvertedIterableInterval.getConverter()	Use ConvertedIterableInterval.getConverterSupplier() instead
net.imglib2.converter.read.ConvertedIterableInterval.getDestinationType()	Use ConvertedIterableInterval.getDestinationSupplier() instead.
net.imglib2.converter.read.ConvertedIterableRealInterval.getConverter()	Use ConvertedIterableRealInterval.getConverterSupplier() instead
net.imglib2.converter.read.ConvertedIterableRealInterval.getDestinationType()	Use ConvertedIterableRealInterval.getDestinationSupplier() instead.
net.imglib2.converter.read.ConvertedRandomAccessible.getConverter()	Use ConvertedRandomAccessible.getConverterSupplier() instead
net.imglib2.converter.read.ConvertedRandomAccessible.getDestinationType()	Use ConvertedRandomAccessible.getDestinationSupplier() instead.
net.imglib2.converter.read.ConvertedRandomAccessibleInterval.getConverter()	Use ConvertedRandomAccessibleInterval.getConverterSupplier() instead
net.imglib2.converter.read.ConvertedRandomAccessibleInterval.getDestinationType()	Use ConvertedRandomAccessibleInterval.getDestinationSupplier() instead.
net.imglib2.converter.read.ConvertedRealRandomAccessible.getConverter()	Use ConvertedRealRandomAccessible.getConverterSupplier() instead
net.imglib2.converter.read.ConvertedRealRandomAccessible.getDestinationType()	Use ConvertedRealRandomAccessible.getDestinationSupplier() instead.
net.imglib2.converter.read.ConvertedRealRandomAccessibleRealInterval.getConverter()	Use ConvertedRealRandomAccessibleRealInterval.getConverterSupplier() instead
net.imglib2.converter.read.ConvertedRealRandomAccessibleRealInterval.getDestinationType()	Use ConvertedRealRandomAccessibleRealInterval.getDestinationSupplier() instead.
net.imglib2.Cursor.copyCursor()	Use Cursor.copy() instead
net.imglib2.FinalRealInterval.createMinSize(double...)
net.imglib2.img.array.ArrayImgFactory.create(long[], T)
net.imglib2.img.array.ArrayImgs.bits(A, long...)	use ArrayImgs.booleans(BooleanAccess, long...)
net.imglib2.img.array.ArrayImgs.unsignedLongss(long[], long...)	use ArrayImgs.unsignedLongs(long[], long...)
net.imglib2.img.cell.CellImgFactory.create(long[], T)
net.imglib2.img.cell.CellImgFactory.verifyDimensions(int[])	This method has been deprecated in favor of Dimensions.verify(int...).
net.imglib2.img.cell.CellImgFactory.verifyDimensions(long[])	This method has been deprecated in favor of Dimensions.verify(long...).
net.imglib2.img.ImgFactory.cache(T)
net.imglib2.img.ImgFactory.create(int[], T)
net.imglib2.img.ImgFactory.create(long[], T)
net.imglib2.img.ImgFactory.create(Supplier<T>, int[])
net.imglib2.img.ImgFactory.create(Supplier<T>, long...)
net.imglib2.img.ImgFactory.create(Supplier<T>, Dimensions)
net.imglib2.img.ImgFactory.create(Dimensions, T)
net.imglib2.img.list.ListImgFactory.create(long[], T)
net.imglib2.img.NativeImgFactory.create(long[], T)
net.imglib2.img.planar.PlanarImgFactory.create(long[], T)
net.imglib2.img.sparse.NtreeImgFactory.create(long[], T)
net.imglib2.KDTree.getRoot()	KDTreeNode is now a re-usable proxy (like NativeType). To work with existing code, KDTreeNode.left(), KDTreeNode.right(), KDTree.getRoot() etc create new objects in each call, instead of re-using existing proxies. Code using that should be rewritten to reuse proxies, if possible.
net.imglib2.KDTreeNode.left()	KDTreeNode is now a re-usable proxy (like NativeType). To work with existing code, KDTreeNode.left(), KDTreeNode.right(), KDTree.getRoot() etc create new objects in each call, instead of re-using existing proxies. Code using that should be rewritten to reuse proxies, if possible.
net.imglib2.KDTreeNode.right()	KDTreeNode is now a re-usable proxy (like NativeType). To work with existing code, KDTreeNode.left(), KDTreeNode.right(), KDTree.getRoot() etc create new objects in each call, instead of re-using existing proxies. Code using that should be rewritten to reuse proxies, if possible.
net.imglib2.RandomAccess.copyRandomAccess()
net.imglib2.RealCursor.copyCursor()	Use RealCursor.copy() instead
net.imglib2.RealRandomAccess.copyRealRandomAccess()
net.imglib2.type.NativeType.decIndex()	Use index().dec() instead. If possible, request the index() object only once and re-use it.
net.imglib2.type.NativeType.decIndex(int)	Use index().dec(int) instead. If possible, request the index() object only once and re-use it.
net.imglib2.type.NativeType.getIndex()	Use index().get() instead. If possible, request the index() object only once and re-use it.
net.imglib2.type.NativeType.incIndex()	Use index().inc() instead. If possible, request the index() object only once and re-use it.
net.imglib2.type.NativeType.incIndex(int)	Use index().inc(int) instead. If possible, request the index() object only once and re-use it.
net.imglib2.type.NativeType.updateIndex(int)	Use index().set(int) instead. If possible, request the index() object only once and re-use it.
net.imglib2.type.numeric.integer.GenericByteType.getValue()	Use GenericByteType.getByte() instead.
net.imglib2.type.numeric.integer.GenericByteType.setValue(byte)	Use GenericByteType.setByte(byte) instead.
net.imglib2.type.numeric.integer.GenericIntType.getValue()	Use GenericIntType.getInt() instead.
net.imglib2.type.numeric.integer.GenericIntType.setValue(int)	Use GenericIntType.setInt(int) instead.
net.imglib2.type.numeric.integer.GenericLongType.getValue()	Use GenericLongType.getLong() instead.
net.imglib2.type.numeric.integer.GenericLongType.setValue(long)	Use GenericLongType.setLong(long) instead.
net.imglib2.type.numeric.integer.GenericShortType.getValue()	Use GenericShortType.getShort() instead.
net.imglib2.type.numeric.integer.GenericShortType.setValue(short)	Use GenericShortType.setShort(short) instead.
net.imglib2.type.numeric.integer.UnsignedLongType.compare(long, long)	Use Long.compareUnsigned(long, long) instead.
net.imglib2.util.ConstantUtils.constantRandomAccessibleInterval(T, int, Interval)
net.imglib2.util.Intervals.createMinSizeReal(double...)
net.imglib2.util.Intervals.equalDimensions(Interval, Interval)
net.imglib2.util.Localizables.asLongArray(Localizable)	Use Localizable.positionAsLongArray().
net.imglib2.util.Util.genericArray(int)
net.imglib2.util.Util.getTypeFromInterval(F)
net.imglib2.util.Util.getTypeFromRealInterval(F)
net.imglib2.view.Views.expandValue(RandomAccessibleInterval<T>, T, long...)	use expandValue with unbounded type parameter T
net.imglib2.view.Views.extendValue(F, T)	use extendValue with unbounded type parameter T
net.imglib2.view.Views.iterable(RandomAccessibleInterval<T>)	Because RandomAccessibleInterval extends IterableInterval now, this is no longer necessary.
net.imglib2.view.Views.offset(RandomAccessible<T>, long...)	Please use Views.translateInverse(RandomAccessible, long...) instead.
net.imglib2.view.Views.offset(RandomAccessibleInterval<T>, long...)	Please use Views.translateInverse(RandomAccessibleInterval, long...) instead.
net.imglib2.view.Views.permuteCoordinateInverse(RandomAccessibleInterval<T>, int[], int)	use Views.permuteCoordinatesInverse(RandomAccessibleInterval, int[], int)

Deprecated Constructors

Constructor	Description
net.imglib2.display.screenimage.awt.ArrayImgAWTScreenImage(T, Object, long[])
net.imglib2.img.array.ArrayImg(Object, long[], Fraction)
net.imglib2.img.array.ArrayImgFactory()
net.imglib2.img.cell.CellImgFactory()
net.imglib2.img.cell.CellImgFactory(int...)
net.imglib2.img.ImgFactory()
net.imglib2.img.ImgView(RandomAccessibleInterval<T>, ImgFactory<T>)
net.imglib2.img.list.ListImgFactory()
net.imglib2.img.NativeImgFactory()
net.imglib2.img.planar.PlanarImg(long[], Fraction)	Use PlanarImg(List, long[], Fraction) instead.
net.imglib2.img.planar.PlanarImgFactory()
net.imglib2.img.sparse.NtreeImgFactory()
net.imglib2.interpolation.Interpolant(EuclideanSpace, InterpolatorFactory<T, F>)	use the compile time safe constructor Interpolant(Object, InterpolatorFactory, int) instead
net.imglib2.util.RealSum(int)