Package net.imglib2.transform.integer.shear

Class ShearTransform

java.lang.Object

net.imglib2.transform.integer.shear.AbstractShearTransform

net.imglib2.transform.integer.shear.ShearTransform

All Implemented Interfaces:

BoundingBoxTransform, InvertibleTransform, Transform

public class ShearTransform
extends AbstractShearTransform

Forward implementation of the most simple case of a shear transform: coordinate[ shearDimension ] += coordinate[ referenceDimension ]

Field Summary

Fields inherited from class net.imglib2.transform.integer.shear.AbstractShearTransform

inverse, nDim, referenceDimension, shearDimension

Constructor Summary

Constructors

Modifier	Constructor	Description
	ShearTransform(int nDim, int shearDimension, int referenceDimension)
protected	ShearTransform(int nDim, int shearDimension, int referenceDimension, AbstractShearTransform inverse)	Protected constructor for passing an inverse to avoid construction of unnecessary objects.

Method Summary

Modifier and Type	Method	Description
void	apply(int[] source, int[] target)	Apply the Transform to a source vector to obtain a target vector.
void	apply(long[] source, long[] target)	Apply the Transform to a source vector to obtain a target vector.
void	apply(Localizable source, Positionable target)	Apply the Transform to a source Localizable to obtain a target Positionable.
ShearTransform	copy()
long[]	getShear()
BoundingBox	transform(BoundingBox bb)	Return a transformed bounding box.

Methods inherited from class net.imglib2.transform.integer.shear.AbstractShearTransform

applyInverse, applyInverse, applyInverse, getReferenceDimension, getShearDimension, inverse, numDimensions, numSourceDimensions, numTargetDimensions

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ShearTransform

public ShearTransform(int nDim,
                      int shearDimension,
                      int referenceDimension)

Parameters:

nDim - Number of dimensions (source and target dimensions must be the same)

shearDimension - Dimension to be sheared.

referenceDimension - Dimension used as reference for shear.

ShearTransform

protected ShearTransform(int nDim,
                         int shearDimension,
                         int referenceDimension,
                         AbstractShearTransform inverse)

Protected constructor for passing an inverse to avoid construction of unnecessary objects.

Parameters:

nDim - Number of dimensions (source and target dimensions must be the same)

shearDimension - Dimension to be sheared.

referenceDimension - Dimension used as reference for shear.

inverse -

Method Detail

apply

public void apply(long[] source,
                  long[] target)

Description copied from interface: Transform

Apply the Transform to a source vector to obtain a target vector.

Parameters:

source - source coordinates.

target - set this to the target coordinates.

apply

public void apply(int[] source,
                  int[] target)

Description copied from interface: Transform

Apply the Transform to a source vector to obtain a target vector.

Parameters:

source - source coordinates.

target - set this to the target coordinates.

apply

public void apply(Localizable source,
                  Positionable target)

Description copied from interface: Transform

Apply the Transform to a source Localizable to obtain a target Positionable.

Parameters:

source - source coordinates.

target - set this to the target coordinates.

copy

public ShearTransform copy()

Specified by:

copy in class AbstractShearTransform

getShear

public long[] getShear()

Specified by:

getShear in class AbstractShearTransform

transform

public BoundingBox transform(BoundingBox bb)

Description copied from interface: BoundingBoxTransform

Return a transformed bounding box. The transformation can be carried out in-place.

Returns:

the transformed bounding box