Package net.imglib2.transform.integer.shear

Class AbstractShearTransform

java.lang.Object

net.imglib2.transform.integer.shear.AbstractShearTransform

All Implemented Interfaces:

BoundingBoxTransform, InvertibleTransform, Transform

Direct Known Subclasses:

InverseShearTransform, ShearTransform

public abstract class AbstractShearTransform
extends java.lang.Object
implements InvertibleTransform, BoundingBoxTransform

Most simple case of a shear transform that just implements for a integer valued coordinate: coordinate[ shearDimension ] += coordinate[ referenceDimension ] (forward) coordinate[ shearDimension ] -= coordinate[ referenceDimension ] (backward) This abstract class holds the inverse and implements applyInverse in terms of inverse.apply

Field Summary

Fields

Modifier and Type	Field	Description
protected AbstractShearTransform	inverse
protected int	nDim
protected int	referenceDimension
protected int	shearDimension

Constructor Summary

Constructors

Modifier	Constructor	Description
protected	AbstractShearTransform(int nDim, int shearDimension, int referenceDimension)
protected	AbstractShearTransform(int nDim, int shearDimension, int referenceDimension, AbstractShearTransform inverse)

Method Summary

Modifier and Type	Method	Description
void	applyInverse(int[] source, int[] target)	Apply the inverse transform to a target vector to obtain a source vector.
void	applyInverse(long[] source, long[] target)	Apply the inverse transform to a target vector to obtain a source vector.
void	applyInverse(Positionable source, Localizable target)	Apply the inverse transform to a target Localizable to obtain a source Positionable.
abstract AbstractShearTransform	copy()
int	getReferenceDimension()
abstract long[]	getShear()
int	getShearDimension()
AbstractShearTransform	inverse()	Get the inverse transform.
int	numDimensions()
int	numSourceDimensions()	Returns n, the dimension of the source vector.
int	numTargetDimensions()	Returns m, the dimension of the target vector.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface net.imglib2.transform.integer.BoundingBoxTransform

transform

Methods inherited from interface net.imglib2.transform.Transform

apply, apply, apply

Field Detail

nDim

protected final int nDim

shearDimension

protected final int shearDimension

referenceDimension

protected final int referenceDimension

inverse

protected AbstractShearTransform inverse

Constructor Detail

AbstractShearTransform

protected AbstractShearTransform(int nDim,
                                 int shearDimension,
                                 int referenceDimension)

AbstractShearTransform

protected AbstractShearTransform(int nDim,
                                 int shearDimension,
                                 int referenceDimension,
                                 AbstractShearTransform inverse)

Method Detail

getReferenceDimension

public int getReferenceDimension()

numSourceDimensions

public int numSourceDimensions()

Description copied from interface: Transform

Returns n, the dimension of the source vector.

Specified by:

numSourceDimensions in interface Transform

Returns:

the dimension of the source vector.

numTargetDimensions

public int numTargetDimensions()

Description copied from interface: Transform

Returns m, the dimension of the target vector.

Specified by:

numTargetDimensions in interface Transform

Returns:

the dimension of the target vector.

numDimensions

public int numDimensions()

getShearDimension

public int getShearDimension()

applyInverse

public void applyInverse(long[] source,
                         long[] target)

Description copied from interface: InvertibleTransform

Apply the inverse transform to a target vector to obtain a source vector.

Specified by:

applyInverse in interface InvertibleTransform

Parameters:

source - set this to the source coordinates.

target - target coordinates.

applyInverse

public void applyInverse(int[] source,
                         int[] target)

Description copied from interface: InvertibleTransform

Apply the inverse transform to a target vector to obtain a source vector.

Specified by:

applyInverse in interface InvertibleTransform

Parameters:

source - set this to the source coordinates.

target - target coordinates.

applyInverse

public void applyInverse(Positionable source,
                         Localizable target)

Description copied from interface: InvertibleTransform

Apply the inverse transform to a target Localizable to obtain a source Positionable.

Specified by:

applyInverse in interface InvertibleTransform

Parameters:

source - set this to the source coordinates.

target - target coordinates.

inverse

public AbstractShearTransform inverse()

Description copied from interface: InvertibleTransform

Get the inverse transform.

Specified by:

inverse in interface InvertibleTransform

Returns:

the inverse transform

getShear

public abstract long[] getShear()

copy

public abstract AbstractShearTransform copy()