Serialized Form

Package org.spaceroots.mantissa
- Class org.spaceroots.mantissa.MantissaException extends java.lang.Exception implements Serializable
  
  serialVersionUID:
  
  1L
Package org.spaceroots.mantissa.algebra
- Class org.spaceroots.mantissa.algebra.Chebyshev extends OrthogonalPolynomial implements Serializable
  
  serialVersionUID:
  
  -893367988717182601L
- Class org.spaceroots.mantissa.algebra.Hermite extends OrthogonalPolynomial implements Serializable
  
  serialVersionUID:
  
  7910082423686662133L
- Class org.spaceroots.mantissa.algebra.Laguerre extends OrthogonalPolynomial implements Serializable
  
  serialVersionUID:
  
  3213856667479179710L
- Class org.spaceroots.mantissa.algebra.Legendre extends OrthogonalPolynomial implements Serializable
  
  serialVersionUID:
  
  4014485393845978429L
- Class org.spaceroots.mantissa.algebra.OrthogonalPolynomial extends Polynomial.Rational implements Serializable
- Class org.spaceroots.mantissa.algebra.Polynomial extends java.lang.Object implements Serializable
- Class org.spaceroots.mantissa.algebra.Polynomial.Double extends Polynomial implements Serializable
  
  serialVersionUID:
  
  -4210522025715687648L
  - Serialized Fields
    - a
```
double[] a
```
      Coefficients array.
- Class org.spaceroots.mantissa.algebra.Polynomial.Rational extends Polynomial implements Serializable
  
  serialVersionUID:
  
  -794133890636181115L
  - Serialized Fields
    - a
```
RationalNumber[] a
```
      Coefficients array.
- Class org.spaceroots.mantissa.algebra.PolynomialFraction extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  6033909492898954748L
  - Serialized Fields
    - p
```
Polynomial.Rational p
```
      Numerator.
    - q
```
Polynomial.Rational q
```
      Denominator.
- Class org.spaceroots.mantissa.algebra.RationalNumber extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  -324954393137577531L
  - Serialized Fields
    - p
```
java.math.BigInteger p
```
      Numerator.
    - q
```
java.math.BigInteger q
```
      Denominator.
Package org.spaceroots.mantissa.estimation
- Class org.spaceroots.mantissa.estimation.EstimatedParameter extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  -555440800213416949L
  - Serialized Fields
    - name
```
java.lang.String name
```
      Name of the parameter
    - estimate
```
double estimate
```
      Current value of the parameter
    - bound
```
boolean bound
```
      Indicator for bound parameters (ie parameters that should not be estimated)
- Class org.spaceroots.mantissa.estimation.EstimationException extends MantissaException implements Serializable
  
  serialVersionUID:
  
  1613719630569355278L
- Class org.spaceroots.mantissa.estimation.GaussNewtonEstimator extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  -7606628156644194170L
  - Serialized Fields
    - maxIterations
```
int maxIterations
```
    - steadyStateThreshold
```
double steadyStateThreshold
```
    - convergence
```
double convergence
```
    - epsilon
```
double epsilon
```
- Class org.spaceroots.mantissa.estimation.LevenbergMarquardtEstimator extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  5387476316105068340L
  - Serialized Fields
    - measurements
```
WeightedMeasurement[] measurements
```
      Array of measurements.
    - parameters
```
EstimatedParameter[] parameters
```
      Array of parameters.
    - jacobian
```
double[] jacobian
```
      Jacobian matrix.
      Depending on the computation phase, this matrix is either in canonical form (just after the calls to updateJacobian) or in Q.R. decomposed form (after calls to qrDecomposition)
    - cols
```
int cols
```
      Number of columns of the jacobian matrix.
    - solvedCols
```
int solvedCols
```
      Number of solved variables.
    - rows
```
int rows
```
      Number of rows of the jacobian matrix.
    - diagR
```
double[] diagR
```
      Diagonal elements of the R matrix in the Q.R. decomposition.
    - jacNorm
```
double[] jacNorm
```
      Norms of the columns of the jacobian matrix.
    - beta
```
double[] beta
```
      Coefficients of the Householder transforms vectors.
    - permutation
```
int[] permutation
```
      Columns permutation array.
    - rank
```
int rank
```
      Rank of the jacobian matrix.
    - lmPar
```
double lmPar
```
      Levenberg-Marquardt parameter.
    - lmDir
```
double[] lmDir
```
      Parameters evolution direction associated with lmPar.
    - residuals
```
double[] residuals
```
      Residuals array.
      Depending on the computation phase, this array is either in canonical form (just after the calls to updateResiduals) or in premultiplied by Qt form (just after calls to qTy)
    - cost
```
double cost
```
      Cost value (square root of the sum of the residuals).
    - initialStepBoundFactor
```
double initialStepBoundFactor
```
      Positive input variable used in determining the initial step bound.
    - maxCostEval
```
int maxCostEval
```
      Maximal number of cost evaluations.
    - costEvaluations
```
int costEvaluations
```
      Number of cost evaluations.
    - jacobianEvaluations
```
int jacobianEvaluations
```
      Number of jacobian evaluations.
    - costRelativeTolerance
```
double costRelativeTolerance
```
      Desired relative error in the sum of squares.
    - parRelativeTolerance
```
double parRelativeTolerance
```
      Desired relative error in the approximate solution parameters.
    - orthoTolerance
```
double orthoTolerance
```
      Desired max cosine on the orthogonality between the function vector and the columns of the jacobian.
- Class org.spaceroots.mantissa.estimation.WeightedMeasurement extends java.lang.Object implements Serializable
  - Serialized Fields
    - weight
```
double weight
```
    - measuredValue
```
double measuredValue
```
    - ignored
```
boolean ignored
```
Package org.spaceroots.mantissa.fitting
- Class org.spaceroots.mantissa.fitting.AbstractCurveFitter extends java.lang.Object implements Serializable
  - Serialized Fields
    - coefficients
```
EstimatedParameter[] coefficients
```
      Coefficients of the function
    - measurements
```
java.util.List<E> measurements
```
      Measurements vector
    - estimator
```
Estimator estimator
```
      Estimator for the fitting problem.
- Class org.spaceroots.mantissa.fitting.AbstractCurveFitter.FitMeasurement extends WeightedMeasurement implements Serializable
  
  serialVersionUID:
  
  -2682582852369995960L
  - Serialized Fields
    - x
```
double x
```
      Abscissa of the measurement.
- Class org.spaceroots.mantissa.fitting.HarmonicCoefficientsGuesser extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  2400399048702758814L
  - Serialized Fields
    - measurements
```
AbstractCurveFitter.FitMeasurement[] measurements
```
    - a
```
double a
```
    - omega
```
double omega
```
    - phi
```
double phi
```
- Class org.spaceroots.mantissa.fitting.HarmonicFitter extends AbstractCurveFitter implements Serializable
  
  serialVersionUID:
  
  -8722683066277473450L
  - Serialized Fields
    - firstGuessNeeded
```
boolean firstGuessNeeded
```
      Indicator of the need to compute a first guess of the coefficients.
- Class org.spaceroots.mantissa.fitting.PolynomialCoefficient extends EstimatedParameter implements Serializable
  
  serialVersionUID:
  
  5775845068390259552L
  - Serialized Fields
    - degree
```
int degree
```
- Class org.spaceroots.mantissa.fitting.PolynomialFitter extends AbstractCurveFitter implements Serializable
  
  serialVersionUID:
  
  -744904084649890769L
Package org.spaceroots.mantissa.functions
- Class org.spaceroots.mantissa.functions.ExhaustedSampleException extends MantissaException implements Serializable
  
  serialVersionUID:
  
  -1490493298938282440L
- Class org.spaceroots.mantissa.functions.FunctionException extends MantissaException implements Serializable
  
  serialVersionUID:
  
  1455885104381976115L
Package org.spaceroots.mantissa.functions.scalar
- Class org.spaceroots.mantissa.functions.scalar.BasicSampledFunctionIterator extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  -9106690005598356403L
  - Serialized Fields
    - function
```
SampledFunction function
```
      Underlying sampled function.
    - next
```
int next
```
      Next sample element.
- Class org.spaceroots.mantissa.functions.scalar.ComputableFunctionSampler extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  -5127043442851795719L
  - Serialized Fields
    - function
```
ComputableFunction function
```
      Underlying computable function.
    - begin
```
double begin
```
      Beginning abscissa.
    - step
```
double step
```
      Step between points.
    - n
```
int n
```
      Total number of points.
- Class org.spaceroots.mantissa.functions.scalar.ScalarValuedPair extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  1884346552569300794L
  - Serialized Fields
    - x
```
double x
```
      Abscissa of the point.
    - y
```
double y
```
      Scalar ordinate of the point, y = f (x).
Package org.spaceroots.mantissa.functions.vectorial
- Class org.spaceroots.mantissa.functions.vectorial.BasicSampledFunctionIterator extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  -4386278658288500627L
  - Serialized Fields
    - function
```
SampledFunction function
```
      Underlying sampled function.
    - next
```
int next
```
      Next sample element.
- Class org.spaceroots.mantissa.functions.vectorial.ComputableFunctionSampler extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  1368582688313212821L
  - Serialized Fields
    - function
```
ComputableFunction function
```
      Underlying computable function.
    - begin
```
double begin
```
      Beginning abscissa.
    - step
```
double step
```
      Step between points.
    - n
```
int n
```
      Total number of points.
- Class org.spaceroots.mantissa.functions.vectorial.VectorialValuedPair extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  -7397116933564410103L
  - Serialized Fields
    - x
```
double x
```
      Abscissa of the point.
    - y
```
double[] y
```
      Vectorial ordinate of the point, y = f (x).
Package org.spaceroots.mantissa.geometry
- Class org.spaceroots.mantissa.geometry.CardanEulerSingularityException extends MantissaException implements Serializable
  
  serialVersionUID:
  
  -1360952845582206770L
- Class org.spaceroots.mantissa.geometry.NotARotationMatrixException extends MantissaException implements Serializable
  
  serialVersionUID:
  
  5647178478658937642L
- Class org.spaceroots.mantissa.geometry.Rotation extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  -2112458726544145775L
  - Serialized Fields
    - q0
```
double q0
```
      Scalar coordinate of the quaternion.
    - q1
```
double q1
```
      First coordinate of the vectorial part of the quaternion.
    - q2
```
double q2
```
      Second coordinate of the vectorial part of the quaternion.
    - q3
```
double q3
```
      Third coordinate of the vectorial part of the quaternion.
- Class org.spaceroots.mantissa.geometry.Vector3D extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  7318440192750283659L
  - Serialized Fields
    - x
```
double x
```
      Abscissa.
    - y
```
double y
```
      Ordinate.
    - z
```
double z
```
      Height.
Package org.spaceroots.mantissa.linalg
- Class org.spaceroots.mantissa.linalg.DiagonalMatrix extends SquareMatrix implements Serializable
  
  serialVersionUID:
  
  -2965166085913895323L
- Class org.spaceroots.mantissa.linalg.GeneralMatrix extends Matrix implements Serializable
  
  serialVersionUID:
  
  4350328622456299819L
- Class org.spaceroots.mantissa.linalg.GeneralSquareMatrix extends SquareMatrix implements Serializable
  
  serialVersionUID:
  
  -506293526695298279L
  - Serialized Fields
    - permutations
```
int[] permutations
```
    - evenPermutations
```
boolean evenPermutations
```
    - lower
```
LowerTriangularMatrix lower
```
    - upper
```
UpperTriangularMatrix upper
```
- Class org.spaceroots.mantissa.linalg.LowerTriangularMatrix extends SquareMatrix implements Serializable
  
  serialVersionUID:
  
  3592505328858227281L
- Class org.spaceroots.mantissa.linalg.Matrix extends java.lang.Object implements Serializable
  - Serialized Fields
    - rows
```
int rows
```
      number of rows of the matrix.
    - columns
```
int columns
```
      number of columns of the matrix.
    - data
```
double[] data
```
      array of the matrix elements. the elements are stored in a one dimensional array, row after row
- Class org.spaceroots.mantissa.linalg.SingularMatrixException extends MantissaException implements Serializable
  
  serialVersionUID:
  
  7531357987468317564L
- Class org.spaceroots.mantissa.linalg.SquareMatrix extends Matrix implements Serializable
- Class org.spaceroots.mantissa.linalg.SymetricalMatrix extends GeneralSquareMatrix implements Serializable
  
  serialVersionUID:
  
  -2083829252075519221L
- Class org.spaceroots.mantissa.linalg.UpperTriangularMatrix extends SquareMatrix implements Serializable
  
  serialVersionUID:
  
  -197266611942032237L
Package org.spaceroots.mantissa.ode
- Class org.spaceroots.mantissa.ode.AbstractStepInterpolator extends java.lang.Object implements Serializable
  - Serialization Methods
    - readExternal
```
public abstract void readExternal(java.io.ObjectInput in)
                           throws java.io.IOException
```
      Throws:
      
      java.io.IOException
    - writeExternal
```
public abstract void writeExternal(java.io.ObjectOutput out)
                            throws java.io.IOException
```
      Throws:
      
      java.io.IOException
- Class org.spaceroots.mantissa.ode.ContinuousOutputModel extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  2259286184268533249L
  - Serialized Fields
    - initialTime
```
double initialTime
```
      Initial integration time.
    - finalTime
```
double finalTime
```
      Final integration time.
    - forward
```
boolean forward
```
      Integration direction indicator.
    - index
```
int index
```
      Current interpolator index.
    - steps
```
java.util.ArrayList<E> steps
```
      Steps table.
- Class org.spaceroots.mantissa.ode.DerivativeException extends MantissaException implements Serializable
  
  serialVersionUID:
  
  -4100440615830558122L
- Class org.spaceroots.mantissa.ode.DummyStepHandler extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  1804704906852043886L
- Class org.spaceroots.mantissa.ode.DummyStepInterpolator extends AbstractStepInterpolator implements Serializable
  
  serialVersionUID:
  
  1708010296707839488L
  - Serialization Methods
    - readExternal
```
public void readExternal(java.io.ObjectInput in)
                  throws java.io.IOException
```
      Throws:
      
      java.io.IOException
    - writeExternal
```
public void writeExternal(java.io.ObjectOutput out)
                   throws java.io.IOException
```
      Throws:
      
      java.io.IOException
- Class org.spaceroots.mantissa.ode.IntegratorException extends MantissaException implements Serializable
  
  serialVersionUID:
  
  -1390328069787882608L
Package org.spaceroots.mantissa.optimization
- Class org.spaceroots.mantissa.optimization.CostException extends MantissaException implements Serializable
  
  serialVersionUID:
  
  -6099968585593678071L
- Class org.spaceroots.mantissa.optimization.NoConvergenceException extends MantissaException implements Serializable
  
  serialVersionUID:
  
  4854864422540042859L
Package org.spaceroots.mantissa.random
- Class org.spaceroots.mantissa.random.CorrelatedRandomVectorGenerator extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  -88563624902398453L
  - Serialized Fields
    - mean
```
double[] mean
```
      Mean vector.
    - root
```
Matrix root
```
      Permutated Cholesky root of the covariance matrix.
    - rank
```
int rank
```
      Rank of the covariance matrix.
    - generator
```
NormalizedRandomGenerator generator
```
      Underlying generator.
    - normalized
```
double[] normalized
```
      Storage for the normalized vector.
- Class org.spaceroots.mantissa.random.FourTapRandom extends java.util.Random implements Serializable
  
  serialVersionUID:
  
  -4095251494398895580L
  - Serialized Fields
    - fourTapBuffer
```
int[] fourTapBuffer
```
    - n4TapJ
```
int n4TapJ
```
- Class org.spaceroots.mantissa.random.GaussianRandomGenerator extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  5504568059866195697L
  - Serialized Fields
    - generator
```
MersenneTwister generator
```
      Underlying generator.
- Class org.spaceroots.mantissa.random.MersenneTwister extends java.util.Random implements Serializable
  
  serialVersionUID:
  
  7666069655872848609L
  - Serialized Fields
    - mt
```
int[] mt
```
    - mti
```
int mti
```
- Class org.spaceroots.mantissa.random.NotPositiveDefiniteMatrixException extends MantissaException implements Serializable
  
  serialVersionUID:
  
  -6801349873804445905L
- Class org.spaceroots.mantissa.random.UncorrelatedRandomVectorGenerator extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  -9094322067568302961L
  - Serialized Fields
    - mean
```
double[] mean
```
      Mean vector.
    - standardDeviation
```
double[] standardDeviation
```
      Standard deviation vector.
    - generator
```
NormalizedRandomGenerator generator
```
      Underlying scalar generator.
- Class org.spaceroots.mantissa.random.UniformRandomGenerator extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  -6913329325753217654L
  - Serialized Fields
    - generator
```
MersenneTwister generator
```
      Underlying generator.

Serialized Form

Package org.spaceroots.mantissa

Class org.spaceroots.mantissa.MantissaException extends java.lang.Exception implements Serializable

Package org.spaceroots.mantissa.algebra

Class org.spaceroots.mantissa.algebra.Chebyshev extends OrthogonalPolynomial implements Serializable

Class org.spaceroots.mantissa.algebra.Hermite extends OrthogonalPolynomial implements Serializable

Class org.spaceroots.mantissa.algebra.Laguerre extends OrthogonalPolynomial implements Serializable

Class org.spaceroots.mantissa.algebra.Legendre extends OrthogonalPolynomial implements Serializable

Class org.spaceroots.mantissa.algebra.OrthogonalPolynomial extends Polynomial.Rational implements Serializable

Class org.spaceroots.mantissa.algebra.Polynomial extends java.lang.Object implements Serializable

Class org.spaceroots.mantissa.algebra.Polynomial.Double extends Polynomial implements Serializable

Serialized Fields

a

Class org.spaceroots.mantissa.algebra.Polynomial.Rational extends Polynomial implements Serializable

Serialized Fields

a

Class org.spaceroots.mantissa.algebra.PolynomialFraction extends java.lang.Object implements Serializable

Serialized Fields

p

q

Class org.spaceroots.mantissa.algebra.RationalNumber extends java.lang.Object implements Serializable

Serialized Fields

p

q

Package org.spaceroots.mantissa.estimation

Class org.spaceroots.mantissa.estimation.EstimatedParameter extends java.lang.Object implements Serializable

Serialized Fields

name

estimate

bound

Class org.spaceroots.mantissa.estimation.EstimationException extends MantissaException implements Serializable

Class org.spaceroots.mantissa.estimation.GaussNewtonEstimator extends java.lang.Object implements Serializable

Serialized Fields

maxIterations

steadyStateThreshold

convergence

epsilon

Class org.spaceroots.mantissa.estimation.LevenbergMarquardtEstimator extends java.lang.Object implements Serializable

Serialized Fields

measurements

parameters

jacobian

cols

solvedCols

rows

diagR

jacNorm

beta

permutation

rank

lmPar

lmDir

residuals

cost

initialStepBoundFactor

maxCostEval

costEvaluations

jacobianEvaluations

costRelativeTolerance

parRelativeTolerance

orthoTolerance

Class org.spaceroots.mantissa.estimation.WeightedMeasurement extends java.lang.Object implements Serializable

Serialized Fields

weight

measuredValue

ignored

Package org.spaceroots.mantissa.fitting

Class org.spaceroots.mantissa.fitting.AbstractCurveFitter extends java.lang.Object implements Serializable

Serialized Fields

coefficients

measurements

estimator

Class org.spaceroots.mantissa.fitting.AbstractCurveFitter.FitMeasurement extends WeightedMeasurement implements Serializable

Serialized Fields

x

Class org.spaceroots.mantissa.fitting.HarmonicCoefficientsGuesser extends java.lang.Object implements Serializable

Serialized Fields

measurements

a

omega