# Smoldyn configuration file to run abba.bngl BioNetGen network.

# Graphical output
graphics opengl_good

# System space and time definitions
dim 2
boundaries x 0 100 p
boundaries y 0 100 p
time_start 0
time_stop 1000
time_step 0.01

# Molecular species and their properties
species A B
difc A 2
difc B 1
color A red
color B blue
display_size A 1
display_size B 1

start_bng abba
multiply unimolecular_rate 1
multiply bimolecular_rate 1
#BNG2_path ../../../source/BioNetGen/BNG2.pl
expand_rules abba.bngl
read_file abba.net
end_bng

text_display time A B A.1.B.1.0 B.2.0 A.1.B.2.0 A.2.B.2.0

# initial molecules
mol 100 A u u
mol 100 B u u

end_file

