# This file just checks and illustrates the meansqrdisp3 command

define MOLS 500
graphics opengl_good

dim 2
boundaries x 0 100 p
boundaries y 0 100 p

species tracer crowder counter

difc all 1

color tracer red
color crowder black
color counter lightgreen

display_size all 2
display_size counter 0

time_start 0
time_stop 1000
time_step 0.05

mol 20 tracer u u
mol 200 crowder u u

reaction rxn1 tracer + crowder -> tracer + crowder
reaction rxn2 crowder + crowder -> crowder + crowder
reaction rxn3 tracer + tracer -> tracer + tracer
binding_radius rxn1 3
product_placement rxn1 bounce 4
binding_radius rxn2 3
product_placement rxn2 bounce 4
binding_radius rxn3 3
product_placement rxn3 bounce 4

output_files stdout
cmd n 5 meansqrdisp3 tracer all i e MOLS 0.001 stdout pointsource counter 1 0 0
cmd i 20 1000 1 ifmore counter 50 stop

end_file



