idemuxcpp (0.3.0-1) UNRELEASED; urgency=medium

  * Change parallelization to async tasks
  * Choose correction table with smallest compatible barcode set
  * Remove parameter --writer-buffer-gb
  * Add parameter --gzip-block-size

 -- Gregor Entzian <gregor.entzian@lexogen.com>  Tue, 13 Aug 2024 11:11:00 -0400

idemuxcpp (0.2.0-1) UNRELEASED; urgency=medium

  * Auto-detect barcode orientation (--auto-detect)
  * Added additional mapping tables (for Aviti)

 -- Gregor Entzian <gregor.entzian@lexogen.com>  Tue, 07 Nov 2023 11:35:00 -0400

idemuxcpp (0.1.9-1) UNRELEASED; urgency=medium

  * Limit open file handles proportional to number of writing threads
  * New reader buffer and writer buffer parameter

 -- Gregor Entzian <gregor.entzian@lexogen.com>  Thu, 07 Oct 2021 14:30:00 -0400

idemuxcpp (0.1.8-1) UNRELEASED; urgency=medium

  * added comma in correction count csv  

 -- Gregor Entzian <gregor.entzian@lexogen.com>  Wed, 03 Feb 2021 12:13:00 -0400

idemuxcpp (0.1.7-1) UNRELEASED; urgency=medium

  * bug fix: renamed i5 rc files so they get loaded properly

 -- Gregor Entzian <gregor.entzian@lexogen.com>  Thu, 28 Jan 2021 08:29:00 -0400

idemuxcpp (0.1.6-1) UNRELEASED; urgency=medium

  * fixed correction counter indices
  * set limit for pe mode
  * updated sample sheet reader for windows files

 -- Gregor Entzian <gregor.entzian@lexogen.com>  Wed, 30 Nov 2020 08:29:00 -0400

idemuxcpp (0.1.5-1) UNRELEASED; urgency=medium

  * increase maximal open file limit if required
  * fix i1 only mode

 -- Gregor Entzian <gregor.entzian@lexogen.com>  Wed, 18 Nov 2020 10:35:00 -0400

idemuxcpp (0.1.4-1) UNRELEASED; urgency=medium

  * added single end mode.
  * extended sample sheet.
  * allow mixed barcode lengths.

 -- Gregor Entzian <gregor.entzian@lexogen.com>  Mon, 09 Nov 2020 15:39:00 -0400

idemuxcpp (0.1.3-1) UNRELEASED; urgency=medium

  * bugfix zip file reader.
  * optional correction count output file.

 -- Gregor Entzian <gregor.entzian@lexogen.com>  Tue, 03 Nov 2020 11:58:45 -0400

idemuxcpp (0.1.2-1) UNRELEASED; urgency=medium

  * Initial release.

 -- Gregor Entzian <gregor.entzian@lexogen.com>  Mon, 07 Sep 2020 05:44:45 -0400
