Source: idemuxcpp
Maintainer: Lexogen <gregor.entzian@lexogen.com>
Section: science
Priority: optional
Standards-Version: 3.9.8
Build-Depends: debhelper (>= 9.0), autotools-dev, gengetopt, help2man, zlib1g-dev, libboost-dev (>= 1.55), libboost-filesystem-dev (>= 1.55), libboost-system-dev (>= 1.55), libboost-iostreams-dev (>= 1.55), libbamtools-dev (>= 2.3.0)

Package: idemuxcpp
Provides: idemuxcpp
Conflicts: idemuxcpp
Section: science
Architecture: any
Depends: ${shlibs:Depends}, ${misc:Depends}, zlib1g-dev (>= 1.2.8), libboost-dev (>= 1.55), libboost-filesystem-dev (>= 1.55), libboost-system-dev (>= 1.55), libboost-iostreams-dev (>= 1.55), libbamtools-dev (>= 2.3.0)
Description: Demultiplex RNA-seq reads from fastq.gz files into separate files according to their indices.
 Idemux can demultiplex based on i7, i5, and i1 inline barcodes. While this tool
 can generally be used to demultiplex any barcodes (as long as they are 
 correctly supplied and in the fastq header), it performs best when used in 
 combination with Lexogen indices, as it will correct common sequencing errors 
 in the sequenced barcodes. This will allow you to retain more reads from your 
 sequencing experiment while minimizing cross contamination.

