java.lang.Object
- edu.uci.ics.jung.algorithms.layout.AbstractLayout<V,E>
- - edu.uci.ics.jung.algorithms.layout.ISOMLayout<V,E>

All Implemented Interfaces:

com.google.common.base.Function<V,java.awt.geom.Point2D>, Layout<V,E>, IterativeContext, java.util.function.Function<V,java.awt.geom.Point2D>
```
public class ISOMLayout<V,E>
extends AbstractLayout<V,E>
implements IterativeContext
```
Implements a self-organizing map layout algorithm, based on Meyer's self-organizing graph methods.

Nested Class Summary

Nested Classes
Modifier and Type Class Description

protected static class ISOMLayout.ISOMVertexData

Field Summary

Fields
Modifier and Type	Field	Description
`private double`	`adaption`
`private double`	`coolingFactor`
`protected GraphElementAccessor<V,E>`	`elementAccessor`
`private int`	`epoch`
`private double`	`initialAdaption`
`protected com.google.common.cache.LoadingCache<V,ISOMLayout.ISOMVertexData>`	`isomVertexData`
`private int`	`maxEpoch`
`private double`	`minAdaption`
`private int`	`minRadius`
`private java.util.List<V>`	`queue`
`private int`	`radius`
`private int`	`radiusConstantTime`
`private java.lang.String`	`status`

Fields inherited from class edu.uci.ics.jung.algorithms.layout.AbstractLayout
graph, initialized, locations, size

Constructor Summary

Constructors
Constructor Description

ISOMLayout(Graph<V,E> g)

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`private void`	`adjust()`
`private void`	`adjustVertex(V v, java.awt.geom.Point2D tempXYD)`
`boolean`	`done()`	Returns `true` if the vertex positions are no longer being updated.
`protected ISOMLayout.ISOMVertexData`	`getISOMVertexData(V v)`
`java.lang.String`	`getStatus()`
`void`	`initialize()`	Initializes fields in the node that may not have been set during the constructor.
`boolean`	`isIncremental()`	This one is an incremental visualization.
`void`	`reset()`	Resets the layout iteration count to 0, which allows the layout algorithm to continue updating vertex positions.
`void`	`step()`	Advances the current positions of the graph elements.
`private void`	`updateParameters()`

Methods inherited from class edu.uci.ics.jung.algorithms.layout.AbstractLayout
apply, getGraph, getSize, getX, getY, isLocked, lock, lock, offsetVertex, setGraph, setInitializer, setLocation, setLocation, setSize

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface com.google.common.base.Function
equals

Methods inherited from interface java.util.function.Function
andThen, compose

- Field Detail
  - isomVertexData
```
protected com.google.common.cache.LoadingCache<V,ISOMLayout.ISOMVertexData> isomVertexData
```
  - maxEpoch
```
private int maxEpoch
```
  - epoch
```
private int epoch
```
  - radiusConstantTime
```
private int radiusConstantTime
```
  - radius
```
private int radius
```
  - minRadius
```
private int minRadius
```
  - adaption
```
private double adaption
```
  - initialAdaption
```
private double initialAdaption
```
  - minAdaption
```
private double minAdaption
```
  - elementAccessor
```
protected GraphElementAccessor<V,E> elementAccessor
```
  - coolingFactor
```
private double coolingFactor
```
  - queue
```
private java.util.List<V> queue
```
  - status
```
private java.lang.String status
```
- Constructor Detail
  - ISOMLayout
```
public ISOMLayout(Graph<V,E> g)
```
- Method Detail
  - getStatus
```
public java.lang.String getStatus()
```
    Returns:
    
    the current number of epochs and execution status, as a string.
  - initialize
```
public void initialize()
```
    Description copied from interface: Layout
    
    Initializes fields in the node that may not have been set during the constructor. Must be called before the iterations begin.
    
    Specified by:
    
    initialize in interface Layout<V,E>
  - step
```
public void step()
```
    Advances the current positions of the graph elements.
    
    Specified by:
    
    step in interface IterativeContext
  - adjust
```
private void adjust()
```
  - updateParameters
```
private void updateParameters()
```
  - adjustVertex
```
private void adjustVertex(V v,
                          java.awt.geom.Point2D tempXYD)
```
  - getISOMVertexData
```
protected ISOMLayout.ISOMVertexData getISOMVertexData(V v)
```
  - isIncremental
```
public boolean isIncremental()
```
    This one is an incremental visualization.
    
    Returns:
    
    true is the layout algorithm is incremental, false otherwise
  - done
```
public boolean done()
```
    Returns true if the vertex positions are no longer being updated. Currently ISOMLayout stops updating vertex positions after a certain number of iterations have taken place.
    
    Specified by:
    
    done in interface IterativeContext
    
    Returns:
    
    true if the vertex position updates have stopped, false otherwise
  - reset
```
public void reset()
```
    Resets the layout iteration count to 0, which allows the layout algorithm to continue updating vertex positions.
    
    Specified by:
    
    reset in interface Layout<V,E>

Class ISOMLayout<V,​E>

Nested Class Summary

Field Summary

Fields inherited from class edu.uci.ics.jung.algorithms.layout.AbstractLayout

Constructor Summary

Method Summary

Methods inherited from class edu.uci.ics.jung.algorithms.layout.AbstractLayout

Methods inherited from class java.lang.Object

Methods inherited from interface com.google.common.base.Function

Methods inherited from interface java.util.function.Function

Field Detail

isomVertexData

maxEpoch

epoch

radiusConstantTime

radius

minRadius

adaption

initialAdaption

minAdaption

elementAccessor

coolingFactor

queue

status

Constructor Detail

ISOMLayout

Method Detail

getStatus

initialize

step

adjust

updateParameters

adjustVertex

getISOMVertexData

isIncremental

done

reset

Class ISOMLayout<V,E>