ccyclered            package:yeastExpData            R Documentation

~~ _d_a_t_a _n_a_m_e/_k_i_n_d ... ~~

_D_e_s_c_r_i_p_t_i_o_n:

     The data are 2885 yeast genes, common to a number of different
     experiments. The original data were reported by Cho et al. and
     were processed to

_U_s_a_g_e:

     data(ccyclered)

_F_o_r_m_a_t:

     A data frame with 2885 observations on the following 11 variables.

     _C_l_u_s_t_e_r The cluster number the gene was assigned to.

     _D_i_s_t_a_n_c_e The distance from the cluster center?

     _Y._n_a_m_e The name of the gene, using standard yeast nomenclature.

     _S_G_D_I_D The Stanford yeast genome database identifier for the gene.

     _G_E_N_E The common name for the gene.

     _C_h_r_o_m_s_o_m_e The chromosome the gene is located on.

     _S_t_a_r_t The start of the gene, in bases, most likely from the 3'
          end.

     _E_n_d The end of the gene.

     _I_n_t_r_o_n_s The number of introns.

     _E_x_o_n_s The location of the exons.

     _D_e_s_c_r_i_p_t_i_o_n A description of the gene.

_D_e_t_a_i_l_s:

     Cho, et al. discuss the k means clustering of 2885 Saccharomyces
     genes into 30 clusters with measurements taken over two
     synchronized cell cycles.

_S_o_u_r_c_e:

     <URL: http://arep.med.harvard.edu/network_discovery>

_R_e_f_e_r_e_n_c_e_s:

     Cho, et al. (1998) A genome-wide transcriptional analysis of the
     mitotic cell cycle.  Molecular Cell, 2, 65-73.

     Tavazoie, et al. (1999) Systematic determination of genetic
     network architecture. Nature Genetics, 22, 281-285.

_E_x_a_m_p_l_e_s:

     data(ccyclered)

