\HeaderA{tspplot}{Graphical display of tsp objects}{tspplot}
\keyword{misc}{tspplot}
\begin{Description}\relax
Graphical display of tsp objects
\end{Description}
\begin{Usage}
\begin{verbatim}
  tspplot(tspobj)
\end{verbatim}
\end{Usage}
\begin{Arguments}
\begin{ldescription}
\item[\code{tspobj}] A tsp object.
\end{ldescription}
\end{Arguments}
\begin{Details}\relax
tspplot() creates a plot of each top scoring pair.The figure plots 
the expression for the first gene in the TSP pair versus the expression 
for the second gene in the TSP pair across arrays. The user defined 
groups are plotted in the colors red and blue. The score for the pair is
shown across the top of each plot. If there is more than one TSP, 
hitting return will cycle from one TSP to the next.
\end{Details}
\begin{Value}
Nothing of interest.
\end{Value}
\begin{Author}\relax
Jeffrey T. Leek \email{jtleek@jhu.edu}
\end{Author}
\begin{References}\relax
D. Geman, C. d'Avignon, D. Naiman and R. Winslow, "Classifying gene
expression profiles from pairwise mRNA comparisons, Statist. Appl. in Genetics and Molecular Biology, 3, 2004.
\end{References}
\begin{SeeAlso}\relax
\code{\LinkA{tspcalc}{tspcalc}}, \code{\LinkA{ts.pair}{ts.pair}}, \code{\LinkA{tspsig}{tspsig}},\code{\LinkA{predict.tsp}{predict.tsp}}, \code{\LinkA{summary.tsp}{summary.tsp}}
\end{SeeAlso}
\begin{Examples}
\begin{ExampleCode}
  ## Not run: 
  ## Load data
  data(tspdata) 
  tsp1 <- tspcalc(dat,grp)
  tspplot(tsp1)
 
## End(Not run)
\end{ExampleCode}
\end{Examples}

