Package: stam
Title: Structured Analysis of Microarray Data
Version: 1.12.0
Author: Claudio Lottaz
Description: The stam package performs a biologically structured
        classification of microarray profiles according to clinical
        phenotypes. GO terms are used to link classification results to
        biological aspects. We call biologically focused signatures
        corresponding to these class predictions molecular symptoms.
        Thus, stam allows for molecular stratification of patients with
        complex phenotypes according to presence/absence patterns of
        molecular symptoms.
Maintainer: Claudio Lottaz <Claudio.Lottaz@klinik.uni-regensburg.de>
Depends: R (>= 2.7.0), GO.db (>= 2.1.3), Biobase (>= 1.99.5), pamr (>=
        1.37.0), cluster (>= 1.11.10), annaffy (>= 1.11.5), methods (>=
        2.7.0), utils (>= 2.7.0)
Imports: Biobase (>= 1.99.5), methods (>= 2.7.0), pamr (>= 1.37.0),
        cluster (>= 1.11.10)
Suggests: golubEsets (>= 1.4.4), hu6800.db (>= 2.1.4)
biocViews: Microarray, Bioinformatics, Classification
LazyLoad: yes
URL: http://compdiag.uni-regensburg.de/software/index.shtml
License: GPL (>= 2)
Reference: Claudio Lottaz and Rainer Spang. stam - a Bioconductor
        compliant R package for structured analysis of microarray data.
        BMC Bioinformatics. 2005 Aug 25;6(1):211.
Packaged: 2009-04-21 11:28:59 UTC; biocbuild
Built: R 2.9.0; i386-pc-mingw32; 2009-04-21 16:14:06 UTC; windows
