# Principal Coordinates and Hotelling's T-Square method

## Documentation for package ‘pcot2’ version 1.12.0

## User Guides and Package Vignettes

Read overview or browse directory.

## Help Pages

aveProbe | Transform Affymetrix data so that unique genes with multiple probes are represented by a single expression value on each array.
corplot | Produce a plot for jointly visualizing pooled correlation information and expression data for selected genes
corplot2 | Produce a plot for jointly visualizing unpooled correlation information and expression data for selected genes
getImat | Generate an indicator matrix
pcot2 | Principal Coordinates and Hotelling's T-Square