\HeaderA{gomfAmat}{sparse matrix representing accessibilities
of terms in GO MF graph; graph also documented here}{gomfAmat}
\aliasA{goMFgraphDemo}{gomfAmat}{goMFgraphDemo}
\keyword{datasets}{gomfAmat}
\begin{Description}\relax
sparse matrix representing accessibilities
of terms in GO MF graph
\end{Description}
\begin{Usage}
\begin{verbatim}data(gomfAmat); data(goMFgraphDemo)\end{verbatim}
\end{Usage}
\begin{Format}\relax
The format is:
list()
- attr(*, "Dimnames")=List of 2
..$ : chr [1:5399] "GO:0000005" "GO:0000006" "GO:0000007" "GO:0000008" ...
..$ : chr [1:5399] "GO:0000005" "GO:0000006" "GO:0000007" "GO:0000008" ...
- attr(*, "mat")= list()
..- attr(*, "ra")= num [1:33263] 0 1 1 1 1 1 1 1 1 1 ...
..- attr(*, "ja")= int [1:33263] 1 261 203 3073 1741 1744 2820 5367 2035 5356 ...
..- attr(*, "ia")= int [1:5400] 1 4 14 22 24 30 34 45 50 56 ...
..- attr(*, "dimension")= int [1:2] 5399 5399
..- attr(*, "class")= atomic [1:1] matrix.csr
.. ..- attr(*, "package")= chr ".GlobalEnv"
- attr(*, "rowindex")=List of 2
..$ n2i:length 0 \textless{}environment\textgreater{}
..$ i2n:length 0 \textless{}environment\textgreater{}
- attr(*, "colindex")=List of 2
..$ n2i:length 0 \textless{}environment\textgreater{}
..$ i2n:length 0 \textless{}environment\textgreater{}
- attr(*, "class")= atomic [1:1] namedSparse
..- attr(*, "package")= chr ".GlobalEnv"
\end{Format}
\begin{Source}\relax
built from bioconductor graph, GO and ontoTools package tools
\end{Source}

