maDotsDefaults {marray} | R Documentation

## Replace graphical default parameters by user supplied parameters

### Description

This function may be used to compare default graphical parameters for microarray diagnostic plots to user supplied parameters given in `...`. User supplied parameters overwrite the defaults. It is used in `maBoxplot`, `maPlot`, and `maImage`.

### Usage

    maDotsDefaults(dots, defaults)

### Arguments

`dots` | List of user supplied parameters, e.g. from `list(...)`.
`defaults` | List of default parameters, e.g. from the function `maDefaultPar`.

### Value

`args` | List of graphical parameters.

### Author(s)

Sandrine Dudoit, http://www.stat.berkeley.edu/~sandrine.

### References

S. Dudoit and Y. H. Yang. (2002). Bioconductor R packages for exploratory analysis and normalization of cDNA microarray data. In G. Parmigiani, E. S. Garrett, R. A. Irizarry and S. L. Zeger, editors, The Analysis of Gene Expression Data: Methods and Software, Springer, New York.

### See Also

`maDefaultPar`, `maBoxplot`, `maPlot`, `maImage`.

### Examples

    dots<-list(xlab="X1", ylab="Y1")
    defaults<-list(xlab="X1", ylab="Y2", col=2)
    pars<-maDotsDefaults(dots, defaults)

    do.call("plot",c(list(x=1:10), pars))

[Package marray version 1.22.0 Index]