# Efficient design and analysis of factorial two-colour microarray data

## Documentation for package ‘daMA’ version 1.16.0

## Help Pages

analyseMA | ANALYSIS OF FACTORIAL MICROARRAY EXPERIMENTS
cinfo | Vector indexing the matrix cmat
cinfoB.AB | Vector indexing the matrix cmatB.AB
cmat | Contrast matrix describing the experimental questions
cmatB.AB | Contrast matrix describing the experimental questions
core | Internal function of analyseMA
data.3x2 | 3x2 microarray data
designMA | DESIGN OF FACTORIAL MICROARRAY EXPERIMENTS
designs.basic | Basic designs for two-colour factorial 3 x 2 microarray data
designs.composite | Composite designs for two-colour factorial 3 x 2 microarray data
id.3x2 | A vector of length 30012 containing numeric identifiers of the genes from the microarray dataset data.3x2.