trim {RNAither} | R Documentation

## Compute the replicate mean with trimmed values

### Description

Computes the mean of replicate values, omitting the highest and the lowest 5

### Usage

    trim(Ivec, na.rm = T)

### Arguments

`Ivec` | All channel values for a specific siRNA/gene
`na.rm` | Removes NA values

### Value

A double giving the trimmed mean of the given replicate values, i.e. omitting the highest and the lowest 5

### See Also

`rms`, `closestToZero`, `furthestFromZero`, `summarizeReps`, `summarizeRepsNoFiltering`

### Examples

    data(exampleHeader, package="RNAither")
    data(exampleDataset, package="RNAither")

    Indexes <- findReplicates(dataset, "GeneName", "CPSF1")
    replicatemean <- trim(dataset$SigIntensity[Indexes])

[Package RNAither version 1.4.2 Index]