GGtools-package           package:GGtools           R Documentation

_G_G_t_o_o_l_s _P_a_c_k_a_g_e _O_v_e_r_v_i_e_w

_D_e_s_c_r_i_p_t_i_o_n:

     GGtools Package Overview

_D_e_t_a_i_l_s:

     This package provides facilities for analyzing relationships
     between gene expression distributions (singly or in groups) and
     SNP genotype series (chromosome-specific or genome-wide). The
     'gwSnpTests' method is the primary interface.

     Important data classes in use: 'smlSet-class',
     'gwSnpScreenResult-class', defined in GGBase package.

     Main data sets: 'hmceuB36.2021', an excerpt based on chromosomes
     20 and 21, with genotypes for all phase II HapMap SNP and full
     expression data for 90 CEU HapMap cohort members.

     Introductory information is available from vignettes, type
     'openVignette()'.

     Full listing of documented articles is available in HTML view by
     typing 'help.start()' and selecting 'GGtools' package from the
     'Packages' menu or via 'library(help="GGtools")'.

_A_u_t_h_o_r(_s):

     V. Carey

