MVAplotMEDctrl {Agi4x44PreProcess} | R Documentation

## MVA plot

### Description

For each array, the M value is computed for every spot as the difference between the spot intensity in the array and the averaged intensity for that feature over the whole set of arrays. Every kind of feature is identified with different color (gene, controls, etc ...)

### Usage

    MVAplotMEDctrl(RGlist, maintitle, channel = NULL)

### Arguments

`RGlist` | An RGlist object
`maintitle` | character to indicate the title of the graph
`channel` | if 'channel=R', then uses the data stored in dd$R, if channel is missing or 'channel =G' then the data stored in dd$G is used

### Author(s)

Pedro Lopez-Romero

### Examples

            data(dd)
            par(mfrow=c(1,1),ask=TRUE)
            MVAplotMEDctrl(dd,"MVA example",channel="G")

[Package Agi4x44PreProcess version 1.4.0 Index]