aGFF-class	aGFF-class
aGFFCalc-class	aGFFCalc-class
do.aGFF.calc	do.aGFF.calc
example.agff	example.agff
findClosestGene	findClosestGene
findRegions	findRegions
getRefflat	getRefflat
plot,aGFF-method	aGFF-class
plot,aGFFCalc-method	aGFFCalc-class
print,aGFF-method	aGFF-class
print,aGFFCalc-method	aGFFCalc-class
read.resultsGFF	read.resultsGFF
show,aGFF-method	aGFF-class
show,aGFFCalc-method	aGFFCalc-class
write.sgr	write.sgr
