citHeader("A number of different references are relevant for affyPLM and the methodology implemented there in:")
citEntry(entry="phdthesis",
	title="Low Level Analysis of High-density Oligonucleotide Array Data: Background, Normalization and Summarization",
	year = "2004",
	school = "University of California, Berkeley.",
	author = person(first="Benjamin",middle="M",last="Bolstad"),
textVersion="Bolstad, BM (2004) Low Level Analysis of High-density Oligonucleotide Array Data: Background, Normalization and Summarization. Dissertation. University of California, Berkeley." , header = "General methodology for fitPLM, threestep and normalization methods")
citEntry(entry="inbook",
    title = "Quality Assessment of Affymetrix GeneChip Data",
    author = personList(person(first="Benjamin",middle="M",last="Bolstad"),
			person(first="Francois",last="Collin"),
			person(first="Julia",last="Brettschneider"),
			person(first="Ken",last="Simpson"),
			person(first="Leslie",last="Cope"),
			person(first="Rafael",middle="A",last="Irizarry"),
			person(first="Terence",middle="P",last="Speed")),
        booktitle="Bioinformatics and Computational Biology Solutions using R and Bioconductor",
        editor=personList(person("R.","Gentleman"),person("V.","Carey"),person("W.","Huber"),person("R","Irizarry"),person("S","Dudoit")),
        publisher="Springer",
        address="New York",
    year = 2005,
    pages ="33--47",

    textVersion = paste("Bolstad BM, Collin F, Brettschneider J, Simpson K, Cope L, Irizarry RA, and Speed TP. (2005) Quality Assessment of Affymetrix GeneChip Data in Bioinformatics and Computational Biology Solutions Using R and Bioconductor. Gentleman R, Carey V, Huber W, Irizarry R, and Dudoit S. (Eds.), Springer, New York."),
    header="Applying the software routines for quality assessment")
citEntry(entry="article",
	title="Quality assessment for short oligonucleotide arrays.",
	author=personList(person(first="Julia",last="Brettschneider"),
			  person(first="Francois",last="Collin"),
			  person(first="Benjamin",middle="M",last="Bolstad"),
			  	person(first="Terence",middle="P",last="Speed")),
	journal= "Technometrics",
	year="2007",
	volume="In press",
	textVersion=paste("Brettschneider J, Collin F, Bolstad BM, and Speed TP. (2007) Quality assessment for short oligonucleotide arrays. Technometrics. In press"),
	header="Quality assessment methodology, NUSE and RLE")
citFooter("Considerable effort has been put into developing affyPLM. If you make use of this software package please take the time to cite it appropriately.")
