Package: SNPchip
Version: 1.6.0
Title: Classes and Methods for high throughput SNP chip data
Author: Robert Scharpf <rscharpf@jhsph.edu> and Ingo Ruczinski
Maintainer: Robert Scharpf <rscharpf@jhsph.edu>
Depends: R (>= 2.6.0), Biobase (>= 1.15.19), methods, oligoClasses (>=
        1.1.13), graphics
Suggests: RSQLite, geneplotter, stats, graphics, VanillaICE,
        RColorBrewer
Description: This package defines classes and functions for plotting
        copy number and genotype in high throughput SNP platforms such
        as Affymetrix and Illumina.  In particular, SNPchip is a useful
        add-on to the oligo package for visualizing SNP-level estimates
        after pre-processing.
License: LGPL version 2 or newer
LazyLoad: yes
Collate: AllClasses.R AllGenerics.R methods-ParESet.R
        initialize-methods.R methods-SnpLevelSet.R methods-SnpCallSet.R
        methods-AnnotatedDataFrame.R methods-oligoSnpSet.R
        methods-RatioSnpSet.R plotSnp-methods.R methods-list.R
        functions.R
biocViews: DNACopyNumber, SNPsAndGeneticVariability, Visualization
URL: http://www.biostat.jhsph.edu/~iruczins/software/snpchip.html
Packaged: Wed Oct 22 03:26:40 2008; biocbuild
Built: R 2.8.0; ; 2008-10-22 10:25:24; windows
