## MANOR: analysis of an array with spatial gradient

##### 2008-10-22, 3:20:59 AM

Profile after normalization: 3227 clones (97%)

## Spot-level flag report

Flag label | Flag code | Parameter | Flagged spots | Flagged spots(%)
--- | --- | --- | --- | ---
Local bias | S | - | 0 | 0
Image analysis | G | - | 61 | 1
Low signal to noise ratio | B | 3 | 0 | 0
Bad quality clone | V | 2 | 204 | 2
No genome position | P | - | 0 | 0
Unique spot | U | - | 1 | 0
Amplicon | A | 1 | 0 | 0
Poor replicate consistency | E | 0.1 | 545 | 5
not flagged | OK | - | 9989 | 92

## Quality criteria

Label | Value
--- | ---
Local signal variability along the genome | 0.032
Average variability among replicates | 0.05
Dynamics of the DNA copy number variation | 0.294