strMultPop {GGtools} | R Documentation

## serialization of a table from Stringer's multipopulation eQTL report

### Description

serialization of a table from Stringer's multipopulation eQTL report

### Usage

    data(strMultPop)

### Format

A data frame with 39649 observations on the following 12 variables.

`rsid`
  a factor with levels rs...
`genesym`
  a factor with levels `37865` `39692` `ABC1` `ABCD2` `ABHD4` `ACAS2` ...
`illv1pid`
  a factor with levels `GI_10047105-S` `GI_10092611-A` `GI_10190705-S` `GI_10567821-S` `GI_10835118-S` `GI_10835186-S` ...
`snpChr`
  a numeric vector
`snpCoordB35`
  a numeric vector
`probeMidCoorB35`
  a numeric vector
`snp2probe`
  a numeric vector
`minuslog10p`
  a numeric vector
`adjR2`
  a numeric vector
`assocGrad`
  a numeric vector
`permThresh`
  a numeric vector
`popSet`
  a factor with levels `CEU-CHB-JPT` `CEU-CHB-JPT-YRI` `CHB-JPT`

### Details

imported from the PDF(!) distributed by Stranger et al as supplement to PMID 17873874

### Source

PMID 17873874 supplement

### References

PMID 17873874 supplement

### Examples

    data(strMultPop)
    strMultPop[1:2,]

[Package GGtools version 3.0.0 Index]