invokePhase-methods {GGtools} | R Documentation

## ~~ Methods for Function invokePhase in Package ‘GGtools’ ~~

### Description

~~ Methods for function `invokePhase` in Package `GGtools' ~~

### Methods

x = "snp.matrix", cnum = "chrnum", parmstring = "character", globpname = "character", where2run = "character", doParse = "logical"
  transform snp.matrix entity to phaseInput (uses tempfile()) and invokes PHASE
x = "phaseInput", cnum = "chrnum", parmstring = "character", globpname = "character", where2run = "character", doParse = "logical"
  for prepared 'phaseInput' structure, invoke PHASE

### Examples

    ## Not run:
    data(smtest)
    invokePhase(smtest, chrnum(20), "", Sys.getenv("PHASE_LOC"),
       ".", TRUE)
    ## End(Not run)

[Package GGtools version 3.0.0 Index]