strMultPop              package:GGtools              R Documentation

_s_e_r_i_a_l_i_z_a_t_i_o_n _o_f _a _t_a_b_l_e _f_r_o_m _S_t_r_i_n_g_e_r'_s _m_u_l_t_i_p_o_p_u_l_a_t_i_o_n _e_Q_T_L _r_e_p_o_r_t

_D_e_s_c_r_i_p_t_i_o_n:

     serialization of a table from Stringer's multipopulation eQTL
     report

_U_s_a_g_e:

     data(strMultPop)

_F_o_r_m_a_t:

     A data frame with 39649 observations on the following 12
     variables.

     '_r_s_i_d' a factor with levels rs...

     '_g_e_n_e_s_y_m' a factor with levels '37865' '39692' 'ABC1' 'ABCD2'
          'ABHD4' 'ACAS2' ...

     '_i_l_l_v_1_p_i_d' a factor with levels 'GI_10047105-S' 'GI_10092611-A'
          'GI_10190705-S' 'GI_10567821-S' 'GI_10835118-S'
          'GI_10835186-S'  ...

     '_s_n_p_C_h_r' a numeric vector

     '_s_n_p_C_o_o_r_d_B_3_5' a numeric vector

     '_p_r_o_b_e_M_i_d_C_o_o_r_B_3_5' a numeric vector

     '_s_n_p_2_p_r_o_b_e' a numeric vector

     '_m_i_n_u_s_l_o_g_1_0_p' a numeric vector

     '_a_d_j_R_2' a numeric vector

     '_a_s_s_o_c_G_r_a_d' a numeric vector

     '_p_e_r_m_T_h_r_e_s_h' a numeric vector

     '_p_o_p_S_e_t' a factor with levels 'CEU-CHB-JPT' 'CEU-CHB-JPT-YRI'
          'CHB-JPT'

_D_e_t_a_i_l_s:

     imported from the PDF(!) distributed by Stranger et al as
     supplement to  PMID 17873874

_S_o_u_r_c_e:

     PMID 17873874 supplement

_R_e_f_e_r_e_n_c_e_s:

     PMID 17873874 supplement

_E_x_a_m_p_l_e_s:

     data(strMultPop)
     strMultPop[1:2,]

