boxplotNegCtrl {Agi4x44PreProcess} | R Documentation

## Boxplot of Signals and Negative Controls

### Description

For each array, it shows the boxplot for the genes (red) and negative controls (green)

### Usage

    boxplotNegCtrl(RGlist, Log2, channel)

### Arguments

`RGlist` | An RGlist object
`Log2` | logical, if `TRUE` it assumes that the data are in log2 scale
`channel` | if 'channel=R', then uses the data stored in dd$R, if channel is missing or 'channel =G' then the data stored in dd$G is used

### Details

It allows the comparison of the gene signals with the signals of the negative controls.

### Author(s)

Pedro Lopez-Romero

### Examples

    ## Not run:
            data(dd)
            boxplotNegCtrl(dd,Log2=FALSE,channel="G")
    ## End(Not run)

[Package Agi4x44PreProcess version 1.2.0 Index]