
@string	(SCRIBE-NOTE = {.....})




@Article{Joslyn04,
  author = 	 {Cliff A. Joslyn
                  and Susan M. Mniszewski
                  and Andy Fulmer
                  and Gary Heaton},
  title = 	 {{The Gene Ontology Categorizer}},
  journal = 	 {Bioinformatics},
  year = 	 {2004},
  OPTkey = 	 {},
  volume = 	 {20},
  number = 	 {Suppl. 1},
  pages = 	 {i169-i177},
  month = 	 {March 1},
  OPTnote = 	 {},
  OPTannote = 	 {}
}



@Article{Balasub04,
  author = 	 {Raji Balasubramanian
                  and Thomas LaFramboise
                  and Denise Scholtens
                  and Robert Gentleman},
  title = 	 {A graph-theoretic approach to testing associations between disparate sources
                  of functional genomics data},
  journal = 	 {Bioinformatics},
  year = 	 {2004},
  OPTkey = 	 {},
  volume = 	 {20},
  number = 	 {18},
  pages = 	 {3353-3362},
  month = 	 {July 15},
  OPTnote = 	 {},
  OPTannote = 	 {}
}


@InProceedings{Gross06,
  author = 	 {Steffen Grossmann 
                  and Sebastian Bauer
                  and Peter N. Robinson
                  and Martin Vingron},
  title = 	 {An Improved Statistic for Detecting Over-represented {G}ene {O}ntology Annotations
                  in Gene Sets},
  OPTcrossref =  {},
  OPTkey = 	 {},
  booktitle = {Proc. 10th Ann. Int. Conf. on Res. in Comput. Biol. (RECOMB '06)},
  OPTpages = 	 {},
  year = 	 {2006},
  OPTeditor = 	 {},
  OPTvolume = 	 {},
  OPTnumber = 	 {},
  OPTseries = 	 {},
  address = 	 {Venice},
  month = 	 {April 2-5},
  OPTorganization = {},
  OPTpublisher = {},
  OPTnote = 	 {},
  OPTannote = 	 {}
}




@Article{Khatri05,
  author = 	 {Purvesh Khatri
                  and Sorin Draghici},
  title = 	 {Ontological analysis of gene expression data: current tools, limitations, and
                  open problems},
  journal = 	 {Bioinformatics},
  year = 	 {2005},
  OPTkey = 	 {},
  volume = 	 {21},
  number = 	 {18},
  pages = 	 {3587-3595},
  OPTmonth = 	 {},
  OPTnote = 	 {},
  OPTannote = 	 {}
}



@Article{Al-Shhrour04,
  author = 	 {{Al-Shahrour, F., {\it et al.}}}, 
  title = 	 {{FatiGO:} a web tool for finding significant associations of {G}ene {O}ntology
                  terms with groups of genes},
  journal = 	 {Bioinformatics},
  year = 	 {2004},
  OPTkey = 	 {},
  volume = 	 {20},
  OPTnumber = 	 {},
  pages = 	 {578-580},
  OPTmonth = 	 {},
  OPTnote = 	 {},
  OPTannote = 	 {}
}



@Article{Zeenerg03,
  author = 	 {{Zeeberg, B. R., {\it et al.}}},
  title = 	 {{GoMiner:} a resource for biological interpretation of genomic and 
                  proteomic data},
  journal = 	 {Genome Biology},
  year = 	 {2003},
  OPTkey = 	 {},
  volume = 	 {4},
  number = 	 {4},
  pages = 	 {R28},
  month = 	 {23 March},
  OPTnote = 	 {},
  OPTannote = 	 {}
}



@Article{Draghici03,
  author =	 {Sorin Draghici 
                  and Purvesh Khatri 
                  and Rui P. Martins
                  and Charles Ostermeier
                  and Stephen A. Krwetz},
  title =	 {{G}lobal functional profiling of gene
                  expression},
  OPTkey =	 {},
  pages =	 {98-104},
  journal =	 {Genomics},
  year =	 {2003},
  volume =	 {81},
  OPTnumber =	 {},
  OPTaddress =	 {},
  OPTmonth =	 {},
  publisher =	 {Elsevier Science},
  OPTannote =	 {}
}



@Article{Chiaretti04,
  author =	 {{Chiaretti, S., {\it et al.}}},
  title =	 {Gene expression profile of adult {T}-cell acute
                  lymphocytic leukemia identifies distinct subsets of
                  patients with different response to therapy and
                  survival},
  journal =	 {Blood},
  year =	 {2004},
  OPTkey =	 {},
  volume =	 {103},
  number =	 {7},
  pages =	 {2771-2778},
  month =	 {April},
  OPTnote =	 {},
  OPTannote =	 {}
}

@Article{Alexa,
  author = 	 {{Alexa, A., {\it et al.}}},
  title = 	 {Improvined Scoring of Functional Groups from Gene Expression Data be Decorrelating GO Graph Structure},
  journal = 	 {Bioinformatics},
  year = 	 {2006},
  OPTkey = 	 {},
  volume = 	 {22},
  number = 	 {13},
  pages = 	 {1600-1607},
  month = 	 {July},
  OPTnote = 	 {},
  OPTannote = 	 {}
}
