# Hidden Variable Dynamic Modeling

## Documentation for package ‘rHVDM’ version 1.6.5

## User Guides and Package Vignettes

Read overview or browse directory.

## Help Pages

fitgene | Fits the optimal kinetic parameter values for a particular gene.
fiveGyMAS5 | Example data for the rHVDM package (time course of irradiated human T cells)
genestoscreen | Genes differentially expressed
HVDMcheck | Checks that an object of class ExpressionSet is compliant with HVDM
HVDMreport | generates an HTML report using the input
p53traingenes | Known p53 targets
screening | Fits the optimal kinetic parameter values for several genes.
training | Performs the HVDM training step and returns a list containing the results