# Basic infrastructure for using oligonucleotide microarray reporter sequence information for preprocessing and quality assessment

## Documentation for package ‘matchprobes’ version 1.12.1

## User Guides and Package Vignettes

Read overview or browse directory.

## Help Pages

basecontent | Obtain the ATCG content of a gene
combineAffyBatch | A function to combine data from different Affymetrix genechip types into one AffyBatch.
complementSeq | Complementary sequence.
countbases | Obtain the ATCG content of a gene
getProbeDataAffy | Read a data file describing the probe sequences on an Affymetrix genechip
getProbeData_1lq | Read a 1lq file for an Affymetrix genechip
longestConsecutive | Obtain the length of the longest substring containing only 'letter'
makeProbePackage | Make a package with probe sequence related data for microarrays
matchprobes | A function to match a query sequence to the sequences of a set of probes.
print.probetable | Print method for probetable objects
revcompDNA | Reverse Sequence
revcompRNA | Reverse Sequence
reverseSeq | Reverse Sequence