aqListGOIDs {annotate} | R Documentation

## List GO Identifiers by GO Ontology

### Description

This function returns a character vector of all GO identifiers in the specified ontologies: Biological Process (BP), Cellular Component (CC), Molecular Function (MF).

### Usage

    aqListGOIDs(ont)

### Arguments

`ont` | A character vector specifying the two-letter codes of the ontologies from which all GO IDs will be retrieved. Entries must be one of `"BP"`, `"CC"`, or `"MF"`.

### Value

A character vector of GO IDs. The vector will contain all GO IDs in the GO ontologies specified by the `ont` argument.

### Author(s)

Seth Falcon

### Examples

    ## all GO IDs in BP
    bp_ids = aqListGOIDs("BP")
    length(bp_ids)

    ## all GO IDs in BP or CC
    bp_or_cc_ids = aqListGOIDs(c("BP", "CC"))
    length(bp_or_cc_ids)

[Package annotate version 1.18.0 Index]