plot_EvG-methods {GGtools} | R Documentation

## plot expression vs. genotype

### Description

plot expression vs. genotype ; getAlleles is supporting infrastructure that may have additional uses

### Methods

gsym = "genesym", rsn = "rsNum", sms = "smlSet"
  displays distributions of gene expression values for gene identified by `gsym` (which must be a symbol identified in the [platform]SYMBOL AnnDbBimap for the smlSet annotation) stratified by SNP genotype for SNP identified by `rsn`.
getAlleles(sms="smlSet", rsn="rsNum")
  return character tokens describing subject-specific genotypes

### Examples

    data(hmceuB36.2021)
    plot_EvG( genesym("CPNE1"), rsNum("rs6060535"), hmceuB36.2021 )
    getAlleles(hmceuB36.2021, rsNum("rs6060535"))[1:5]

[Package GGtools version 2.0.2 Index]