hmceuAmbB36_23a_dbconn        package:GGBase        R Documentation

_S_Q_L_i_t_e _i_n_f_r_a_s_t_r_u_c_t_u_r_e _f_o_r _S_N_P _l_o_c_a_t_i_o_n_s

_D_e_s_c_r_i_p_t_i_o_n:

     SQLite infrastructure for SNP locations

_U_s_a_g_e:

     hmceuAmbB36_23a_dbconn()
     hmceuAmbB36_23a_dbfile()

_D_e_t_a_i_l_s:

     hmceuAmbB36 23a refers to HapMap CEU Ambiguous IUPAC symbols
     denoting SNP for hapmap build 36 version 23a.

     Follows conventions of SQLite annotation package RDBMS
     referencing: the dbconn() function call above evaluates to a
     SQLiteConnection instance; the dbfile() call evaluates to a string
     giving the location of the SQLite file holding the location table.

_V_a_l_u_e:

     See details.

_A_u_t_h_o_r(_s):

     Vince Carey <stvjc@channing.harvard.edu>

_E_x_a_m_p_l_e_s:

     hmceuAmbB36_23a_dbfile()
     con = hmceuAmbB36_23a_dbconn()
     tab = dbListTables(con)
     dbGetQuery(hmceuAmbB36_23a_dbconn() , paste("select * from", tab, " limit 5"))

