snpScreenResult-class {GGBase} | R Documentation

## Class "snpScreenResult" – container approaching obsolescence, retained for legacy purposes, that holds expression vs genotype analysis results; see gwSnpScreenResult for more current approach.

### Description

Class "snpScreenResult" – container approaching obsolescence, retained for legacy purposes, that holds expression vs genotype analysis results; see gwSnpScreenResult for more current approach.

### Objects from the Class

Objects can be created by calls of the form `new("snpScreenResult", ...)`.

### Slots

`.Data`:
  Object of class `"list"` list of inference tables
`call`:
  Object of class `"call"` audit information
`gene`:
  Object of class `"character"` gene name
`locs`:
  Object of class `"numeric"` locations of SNPs
`chr`:
  Object of class `"character"` chromosome in play
`fitter`:
  Object of class `"ANY"` audit information
`annotation`:
  Object of class `"character"` propagated from expression data

### Extends

Class `"list"`, from data part. Class `"vector"`, by class "list", distance 2. Class `"AssayData"`, by class "list", distance 2.

### Methods

No methods defined with class "snpScreenResult" in the signature in GGBase, but see GGtools.

### Note

twSnpScreenResult is provided for multiple gene analyses. See multiGwSnpScreenResult for the more current approach to such analyses

### Author(s)

VJ Carey <stvjc@channing.harvard.edu>

### Examples

    showClass("snpScreenResult")

[Package GGBase version 2.0.4 Index]