GOstats-package	GOstats-package
Bdists	Ndists
combGOGraph	GOstats-defunct
compCorrGraph	compCorrGraph
compGdist	compGdist
condGeneIdUniverse,GOHyperGResult-method	GOHyperGResult-class
conditional,GOHyperGResult-method	GOHyperGResult-class
enumPairs	triadCensus
expectedCounts,GOHyperGResult-method	GOHyperGResult-class
geneCounts,GOHyperGResult-method	GOHyperGResult-class
geneIdUniverse,GOHyperGResult-method	GOHyperGResult-class
getGoGraph	oneGOGraph
getGoGraph,GOHyperGParams,character-method	oneGOGraph
goDag	GOHyperGResult-class
goDag,GOHyperGResult-method	GOHyperGResult-class
GOGraph	oneGOGraph
GOHyperG	GOHyperG
GOHyperGResult-class	GOHyperGResult-class
GOLeaves	GOLeaves
GOstats	GOstats-package
GOstats-defunct	GOstats-defunct
htmlReport,GOHyperGResult-method	GOHyperGResult-class
hyperG2Affy	GOstats-defunct
hyperGtable	GOstats-defunct
hyperGTest	hyperGTest
hyperGTest,GOHyperGParams-method	hyperGTest
idx2dimnames	idx2dimnames
inducedTermGraph	termGraphs
isConditional,GOHyperGResult-method	GOHyperGResult-class
isTriad	triadCensus
makeGOGraph	makeGOGraph
Ndists	Ndists
notConn	notConn
oddsRatios,GOHyperGResult-method	GOHyperGResult-class
oneGOGraph	oneGOGraph
plotGOTermGraph	termGraphs
probeSetSummary	probeSetSummary
pvalues,GOHyperGResult-method	GOHyperGResult-class
reduce2Degreek	triadCensus
selectedGenes	GOHyperGResult-class
shortestPath	shortestPath
simLL	simLL
simLP	simLL
simUI	simLL
summary,GOHyperGResult-method	GOHyperGResult-class
termGraphs	termGraphs
triad	triadCensus
triadCensus	triadCensus
