plot_EvG               package:GGtools               R Documentation

_p_l_o_t _e_x_p_r_e_s_s_i_o_n _v_s _g_e_n_o_t_y_p_e

_D_e_s_c_r_i_p_t_i_o_n:

     plot expression vs genotype

_U_s_a_g_e:

     plot_EvG(reset, gene, snpid, anno="hgfocus")

_A_r_g_u_m_e_n_t_s:

   reset: instance of 'racExSet-class'

    gene: instance of 'genesym-class'

   snpid: character string with RS number for SNP

    anno: character annotation stub, such as 'hgfocus'

_D_e_t_a_i_l_s:

     renders a simple scatter plot of expression vs rare allele count

_V_a_l_u_e:

_N_o_t_e:

_A_u_t_h_o_r(_s):

     Vince Carey <stvjc@channing.harvard.edu>

_R_e_f_e_r_e_n_c_e_s:

_S_e_e _A_l_s_o:

_E_x_a_m_p_l_e_s:

     data(chr20GGdem)
     plot_EvG( chr20GGdem, genesym("CPNE1"), "rs6060535",
       "hgfocus")

