degreeStats {y2hStat} | R Documentation

## A function to calculate the various degree statistics on the induced y2h-data derived directed graph.

### Description

This function will create the adjacency matrix for each experimental set of Y2H data set, and then it will calculate the various degree statistics.

### Usage

    degreeStats(y2h)

### Arguments

`y2h` | A three tiered list. Names of the second tier corresponds to ID of experiment. Names of the third tier should be the bait proteins. The entries of the third tier are character vectors of proteins detected as prey

### Value

`degree` | A numeric vector of the out-degree for each bait protein
`min` | A numeric - the minimal degree
`max` | A numeric - the maximal degree
`med` | A numeric - the median degree
`mean` | A numeric - the mean degree

### Author(s)

T Chiang

### Examples

    data(y2hSysGW)
    eg = y2hSysGW[3]
    degreeStats(eg)

[Package y2hStat version 1.2.0 Index]