createTables {y2hStat} | R Documentation

## A function to create a table of the various summary statistics for the Y2H experimental derived data.

### Description

This function takes in a three tiered list. The top tier is the main list which is passed in by the user. The second tier set of lists should be named or referenced by experimentors. The third tier is a list of bait to prey associations. The names in the third tier of the list are those proteins sampled as baits, and the entries are character vectors of proteins detected as prey. From this data, the function generates a table of various summary statistics.

### Usage

    createTables(y2h)

### Arguments

`y2h` | A three tiered list. Names of the second tier corresponds to ID of experiment. Names of the third tier should be the bait proteins. The entries of the third tier are character vectors of proteins detected as prey

### Value

A table of statistics:

`Column1` | Number of baits
`Column2` | Number of interactions experiment wide
`Column3` | Ratio of baits to interactions
`Column4` | Min Degree
`Column5` | Max Degree
`Column6` | Median Degree
`Column7` | Mean Degree

### Author(s)

T Chiang

### Examples

    data(y2hSysGW)
    eg = y2hSysGW[3]
    createTables(eg)

[Package y2hStat version 1.2.0 Index]