Biobase-package	Biobase-package
$,annotatedDataset-method	internals
$,phenoData-method	internals
$<-,annotatedDataset-method	internals
$<-,phenoData-method	internals
aaMap	data.aaMap
abstract	internals
abstract,exprSet-method	internals
abstract,MIAME-method	internals
addNonExisting	internals
addPDF2Vig	internals
addVarMetadataEntry	internals
addVarMetadataEntry,phenoData,character,character-method	internals
addVig2Menu	internals
addVig4Unix	internals
addVig4Win	internals
addVigs2WinMenu	addVig2Menu
aggenv	internals
aggenv,aggregator-method	internals
aggfun	internals
aggfun,aggregator-method	internals
Aggregate	Aggregate
aggregator	class.aggregator
aggregator-class	internals
annotatedDataset	class.annotatedDataset
annotatedDataset-class	internals
annotation	internals
annotation,eSet-method	internals
annotation,exprSet-method	internals
annotation<-	internals
annotation<-,eSet-method	internals
annotation<-,exprSet-method	internals
as.data.frame.exprSet	class.exprSet
as.data.frame.exprSet,exprSet-method	internals
assayData	class.eSet
assayData,eSet-method	internals
assayData,exprSet-method	internals
assayData<-	internals
assayData<-,eSet,listOrEnv-method	internals
bbsym	internals
Biobase	Biobase-package
characterORMIAME-class	internals
class:aggregator	class.aggregator
class:annotatedDataset	class.annotatedDataset
class:characterORMIAME	class.characterORmiame
class:container	class.container
class:eSet	class.eSet
class:exprList	class.exprList
class:exprMatrix	class.exprMatrix
class:exprSet	class.exprSet
class:MIAME	class.MIAME
class:phenoData	class.phenoData
coerce,data.frame,phenoData-method	internals
coerce,exprSet,eSet-method	internals
combine	combine
combine,eSet,ANY-method	internals
combine,eSet,eSet-method	internals
combine,phenoData,ANY-method	internals
combine,phenoData,phenoData-method	internals
container	class.container
container-class	internals
content	internals
content,container-method	internals
contents	contents
contents,environment-method	internals
convertVarLabels	internals
convertVarLabels,phenoData-method	internals
copyEnv	copyEnv
copySubstitute	copySubstitute
createPackage	createPackage
data.frameOrNULL-class	internals
data:aaMap	data.aaMap
data:eset	data.eset
data:exSet	data.exSet
data:geneData	data.geneData
description	internals
description,eSet-method	internals
description,exprSet-method	internals
description<-	internals
description<-,eSet-method	internals
description<-,exprSet-method	internals
df2pD	internals
dim,eSet-method	internals
dumpPackTxt	dumpPackTxt
eList	class.eSet
eList,eSet-method	internals
eList<-	internals
eList<-,eSet,listOrEnv-method	internals
esApply	esApply
eSet	class.eSet
eset	data.eset
eSet-class	internals
expinfo	internals
expinfo,MIAME-method	internals
exprMatrix-class	internals
exprs	internals
exprs,eSet-method	internals
exprs,exprSet-method	internals
exprs2excel	class.exprSet
exprs2excel,exprSet-method	internals
exprs<-	internals
exprs<-,eSet,listOrEnv-method	internals
exprs<-,exprSet-method	internals
exprSet	class.exprSet
exprSet-class	internals
exSet	data.exSet
geneCov	internals
geneCovariate	data.geneData
geneData	data.geneData
geneNames	internals
geneNames,exprSet-method	internals
geneNames<-	internals
geneNames<-,exprSet-method	internals
getExpData	internals
getExpData,eSet,character-method	internals
getPkgVigs	getPkgVigs
getUnits	internals
getUnits,phenoData,character-method	internals
getVarMetadata	internals
getVarMetadata,phenoData,character,character-method	internals
getVarMetadata,phenoData,character,missing-method	internals
golubMergeSub	class.eSet
hybridizations	internals
hybridizations,MIAME-method	internals
initfun	internals
initfun,aggregator-method	internals
iter	internals
iter,exprSet,character,function-method	internals
iter,exprSet,missing,function-method	internals
iter,exprSet,missing,list-method	internals
l2e	copyEnv
length,container-method	internals
listLen	copyEnv
listOrEnv	class.eSet
listOrEnv-class	internals
locked	internals
locked,container-method	internals
MIAME	class.MIAME
MIAME-class	internals
multiassign	multiassign
ncol,eSet-method	internals
normControls	internals
normControls,MIAME-method	internals
note	note
notes	internals
notes,eSet-method	internals
notes,exprSet-method	internals
notes<-	internals
notes<-,eSet-method	internals
notes<-,exprSet-method	internals
openPDF	openPDF
openVignette	openVignette
otherInfo	internals
otherInfo,MIAME-method	internals
package.version	package.version
pData	class.phenoData
pData,annotatedDataset-method	internals
pData,phenoData-method	internals
pData<-	internals
pData<-,annotatedDataset-method	internals
pData<-,phenoData-method	internals
phenoData	class.phenoData
phenoData,annotatedDataset-method	internals
phenoData-class	internals
phenoData<-	internals
phenoData<-,annotatedDataset,phenoData-method	internals
preproc	internals
preproc,MIAME-method	internals
read.exprSet	read.exprSet
read.MIAME	read.MIAME
read.pD	internals
read.phenoData	read.phenoData
reporter	data.reporter
reporterInfo	internals
reporterInfo,annotatedDataset-method	internals
reporterInfo<-	internals
reporterInfo<-,annotatedDataset,data.frame-method	internals
reporterNames	internals
reporterNames,eSet-method	internals
reverseSplit	reverseSplit
rowMax	rowQ
rowMedians	rowQ
rowMin	rowQ
rowQ	rowQ
sampleNames	internals
sampleNames,eSet-method	internals
sampleNames,exprSet-method	internals
sampleNames<-	internals
sampleNames<-,eSet,character-method	internals
sampleNames<-,exprSet-method	internals
samples	internals
samples,MIAME-method	internals
se.exprs	internals
se.exprs,exprSet-method	internals
se.exprs<-	internals
se.exprs<-,exprSet-method	internals
seD	data.geneData
show,container-method	internals
show,eSet-method	internals
show,exprSet-method	internals
show,MIAME-method	internals
show,phenoData-method	internals
split	class.exprSet
split,exprSet,factor,missing-method	internals
split,exprSet,vector,missing-method	internals
split,phenoData,vector,missing-method	internals
strbreak	strbreak
SW	class.eSet
SWPD	class.eSet
swrep	class.eSet
testBioCConnection	testBioCConnection
update2MIAME	class.exprSet
update2MIAME,exprSet-method	internals
varLabels	internals
varLabels,annotatedDataset-method	internals
varLabels,phenoData-method	internals
varMetadata	class.phenoData
varMetadata,phenoData-method	internals
write.exprs	class.exprSet
write.exprs,exprSet-method	internals
[,container-method	internals
[,eSet-method	internals
[,exprSet-method	internals
[,phenoData-method	internals
[[,annotatedDataset-method	internals
[[,container-method	internals
[[,phenoData-method	internals
[[<-,annotatedDataset-method	internals
[[<-,container-method	internals
[[<-,phenoData-method	internals
