Package: oligo
Version: 1.10.4
Title: Tools for low-level analysis of oligonucleotide arrays.
Author: Benilton Carvalho <carvalho@bclab.org>, Rafael A. Irizarry with
        contributions from Ben Bolstad, Vince Carey, Robert Gentleman,
        Wolfgang Huber
Maintainer: Benilton Carvalho <carvalho@bclab.org>
Depends: R (>= 2.10.0), oligoClasses (>= 1.7.12), preprocessCore (>=
        1.7.4)
Imports: splines, affxparser (>= 1.17.3), graphics, utils, stats, DBI
        (>= 0.2-4), Biobase (>= 2.5.5), methods, affyio (>= 1.13.3)
LinkingTo: preprocessCore
Suggests: hapmap100kxba, pd.mapping50k.xba240, pd.hg18.60mer.expr,
        maqcExpression4plex, genefilter, limma, RColorBrewer
Description: A package to analyze oligonucleotide arrays
        (expression/SNP/tiling/exon) at probe-level.
License: LGPL (>= 2)
Collate: AllGenerics.R methods-GeneFeatureSet.R
        methods-ExonFeatureSet.R methods-ExpressionFeatureSet.R
        methods-FeatureSet.R methods-TilingFeatureSet.R
        methods-DBPDInfo.R read.celfiles.R zzz.R readxys.R utils.R
        crlmm.R snprma.R justSNPRMA.R justCRLMM.R methods-snp6.R
        methods-genotype.R
LazyLoad: Yes
biocViews: Microarray, OneChannel, TwoChannel, Preprocessing, SNP,
        DifferentialExpression, DNAMethylation, ExonArray,
        GeneExpression, Bioinformatics, DataImport, Transcription,
        ChIPchip, CopyNumberVariants, CpGIsland
Packaged: 2010-03-23 09:12:54 UTC; biocbuild
Built: R 2.10.1; i386-pc-mingw32; 2010-03-23 14:07:43 UTC; windows
