oligo-package	oligo-package
basecontent	basecontent
basicRMA	basicRMA
bg	IntensityMatrix-methods
bg,FeatureSet-method	IntensityMatrix-methods
bg,TilingFeatureSet2-method	IntensityMatrix-methods
bg<-	IntensityMatrix-methods
bg<-,FeatureSet,matrix-method	IntensityMatrix-methods
bg<-,TilingFeatureSet2,array-method	IntensityMatrix-methods
boxplot	boxplot
boxplot,ExpressionSet-method	boxplot
boxplot,FeatureSet-method	boxplot
cleanPlatformName	read.celfiles
crlmm	crlmm
getContainer	getContainer
getContainer,TilingFeatureSet-method	getContainer
getContainer-methods	getContainer
getCrlmmSummaries	getCrlmmSummaries
getNgsColorsInfo	getNgsColorsInfo
getX	coordinates
getX,DBPDInfo-method	coordinates
getX,FeatureSet-method	coordinates
getX-methods	coordinates
getY	coordinates
getY,DBPDInfo-method	coordinates
getY,FeatureSet-method	coordinates
getY-methods	coordinates
hist	hist
hist,ExpressionSet-method	hist
hist,FeatureSet-method	hist
image	image
image,FeatureSet-method	image
justCRLMM	crlmm
justSNPRMA	justSNPRMA
list.celfiles	list.celfiles
list.xysfiles	list.celfiles
MAplot	MAplot-methods
MAplot,FeatureSet-method	MAplot-methods
MAplot-methods	MAplot-methods
mm	IntensityMatrix-methods
mm,FeatureSet-method	IntensityMatrix-methods
mm,TilingFeatureSet2-method	IntensityMatrix-methods
mm<-	IntensityMatrix-methods
mm<-,FeatureSet,matrix-method	IntensityMatrix-methods
mm<-,TilingFeatureSet2,array-method	IntensityMatrix-methods
plotM	plotM-methods
plotM,SnpQSet,character-method	plotM-methods
plotM,SnpQSet,integer-method	plotM-methods
plotM,SnpQSet,numeric-method	plotM-methods
plotM,TilingQSet,missing-method	plotM-methods
plotM-methods	plotM-methods
pm	IntensityMatrix-methods
pm,FeatureSet-method	IntensityMatrix-methods
pm,TilingFeatureSet2-method	IntensityMatrix-methods
pm<-	IntensityMatrix-methods
pm<-,FeatureSet,matrix-method	IntensityMatrix-methods
pm<-,TilingFeatureSet2,array-method	IntensityMatrix-methods
read.celfiles	read.celfiles
read.celfiles2	read.celfiles
read.xysfiles	read.xysfiles
read.xysfiles2	read.xysfiles
readSummaries	readSummaries
rma	rma
rma,ExonFeatureSet-method	rma
rma,ExpressionFeatureSet-method	rma
rma,GeneFeatureSet-method	rma
sequenceDesignMatrix	sequenceDesignMatrix
snprma	snprma
