edgeR-package	edgeR-package
alpha.approxeb	alpha.approxeb
approx.expected.info	approx.expected.info
calcNormFactors	calcNormFactors
commonCondLogLikDerDelta	commonCondLogLikDerDelta
condLogLikDerDelta	condLogLikDerDelta
condLogLikDerSize	condLogLikDerSize
de4DGE	de4DGE
de4DGEList-class	de4DGEList
deDGE	deDGE
deDGEList-class	deDGEList
DGEList	DGEList
DGEList-class	DGEList-class
EBList-class	EBList
edgeR	edgeR-package
equalizeLibSizes	equalizeLibSizes
estimateCommonDisp	estimateCommonDisp
estimateDispIter	estimateDispIter
estimatePs	estimatePs
estimateSmoothing	estimateSmoothing
estimateTagwiseDisp	estimateTagwiseDisp
exactTest	exactTest
exactTest.matrix	exactTest
findMaxD2	findMaxD2
getCounts	getCounts
interpolateHelper	interpolateHelper
logLikDerP	logLikDerP
maPlot	maPlot
NC1	Tu102
NC2	Tu102
plotFC	plotSmear
plotSmear	plotSmear
q2qnbinom	q2qnbinom
q2qpois	q2qnbinom
quantileAdjust	quantileAdjust
readDGE	readDGE
show,de4DGEList-method	de4DGEList
show,deDGEList-method	deDGEList
show,EBList-method	EBList
show,TopTags-method	topTags
splitIntoGroups	splitIntoGroups
splitIntoGroupsPseudo	splitIntoGroups
subsetting	subsetting
tau2.0.objective	tau2.0.objective
topTags	topTags
TopTags-class	topTags
Tu102	Tu102
Tu98	Tu102
weightedCondLogLikDerDelta	weightedCondLogLikDerDelta
[.DGEList	subsetting
[.TopTags	topTags
