getArrayLayoutLimma {RMAGEML} | R Documentation

## Get layout for limma

### Description

This function gets the genes dataframe.

### Usage

    getArrayLayoutLimma( mageOM, DED = "none" )

### Arguments

`mageOM` | Reference to MAGE Object Model
`DED` | the DesignElement Dimension

### Author(s)

Steffen Durinck, http://www.esat.kuleuven.ac.be/~sdurinck
Joke Allemeersch, http://www.esat.kuleuven.ac.be/~jallemee.

### References

Spellman PT, Miller M, Stewart J, Troup C, Sarkans U, Chervitz S, Bernhart D, Sherlock G, Ball C, Lepage M, Swiatek M, Marks WL, Goncalves J, Markel S, Iordan D, Shojatalab M, Pizarro A, White J, Hubley R, Deutsch E, Senger M, Aronow BJ, Robinson A, Bassett D, Stoeckert CJ Jr and Brazma A. Design and implementation of microarray gene expression markup language (MAGE-ML). Genome Biol. 2002 Aug 23;3(9):RESEARCH0046.

### See Also

`importMAGEOM`

### Examples

    data<-system.file("MAGEMLdata", package="RMAGEML")
    #To obtain a marrayInfo object containing the database identifiers of the features present on the array.#
    mageom<-importMAGEOM(directory=data)
    getArrayLayoutLimma(mageom, DED="DED:707")

[Package RMAGEML version 2.1.0 Index]