cluster {GLAD} | R Documentation

## Optimal number of cluster

### Description

The function `cluster` in an internal function which allows to find the optimal number of cluster in the data.

### Usage

    cluster.default(CGH, Cluster, region, labels, lambda, nmin, nmax, ...)

### Arguments

`CGH` | CGH
`Cluster` | Cluster
`labels` | labels
`lambda` | Penalty λ*.
`nmin` | Minimal number of cluster to find.
`nmax` | Maximal number of cluster to find.
`region` | Label which indicated where outliers are detected.
`...` | Parameters to be passed to the `kernelpen` function.

### Details

This function is called within `findCluster.profileChr`.

### Author(s)

Philippe Hupé, Philippe.Hupe@curie.fr.

### See Also

`findCluster.profileChr`

[Package GLAD version 1.0.1 Index]