getIntensityMatrix {vsn} | R Documentation

## Extract a matrix of microarray intensities from various kinds of objects

### Description

Extract a matrix of microarray intensities from various kinds of objects. This function is called by the function `vsn`, and is normally not called by the user.

### Usage

    getIntensityMatrix (intensities, verbose)

### Arguments

`intensities` | Object of class `exprSet` with raw intensity values from a microarray experiment. Alternatively, this may be a `matrix`, a `data.frame` with all numeric columns or an `marrayRaw` object.
`verbose` | Logical. If TRUE, some messages are printed.

### Value

A numeric matrix.

### Author(s)

Wolfgang Huber http://www.dkfz.de/abt0840/whuber

### See Also

`vsn`

### Examples

      ## see the vignette

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