maBayesian {marray} | R Documentation

## Calculates an Odds Ratio for Each Gene in a Multi-slide Microarray Experiment.

### Description

This function calls the function "lm.series" and "ebayes" in the package "limma" to calculate the log-odds of differential expression by empirical Bayes shrinkage of the standard errors towards a common value.

### Usage

    maBayesian(mraw, ...)

### Arguments

`mraw` | An object of class `matrix`, `dataframe`, `marrayRaw`, `marrayNorm` or `exprSet` that contains gene expression data.
`...` | arguments for the fuction `lm.series` and `ebayes`

### Author(s)

Yee Hwa Yang jean@biostat.ucsf.edu

### Examples

    ## data(swirl)
    ## M <- sweep(maM(swirl), 2, c(1,-1,1,-1), FUN="*")
    ## est <- maBayesian(M)

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