getGnames              package:RMAGEML              R Documentation

_C_r_e_a_t_i_o_n _o_f _a _G_n_a_m_e_s _m_a_r_r_a_y_I_n_f_o _o_b_j_e_c_t

_D_e_s_c_r_i_p_t_i_o_n:

     This function creates a marrayInfo object containing the database
     identifiers of the features present on the array.

_U_s_a_g_e:

     getGnames( mageOM, DED = "none" )

_A_r_g_u_m_e_n_t_s:

  mageOM: Reference to MAGE Object Model

     DED: the DesignElement Dimension

_A_u_t_h_o_r(_s):

     Steffen Durinck, <URL: http://www.esat.kuleuven.ac.be/~sdurinck>
       Joke Allemeersch, <URL:
     http://www.esat.kuleuven.ac.be/~jallemee>.

_R_e_f_e_r_e_n_c_e_s:

     Spellman PT, Miller M, Stewart J, Troup C, Sarkans U, Chervitz S,
     Bernhart D, Sherlock G, Ball C, Lepage M, Swiatek M, Marks WL,
     Goncalves J, Markel S, Iordan D, Shojatalab M, Pizarro A, White J,
     Hubley R, Deutsch E, Senger M, Aronow BJ, Robinson A, Bassett D,
     Stoeckert CJ Jr and Brazma A. Design and implementation of
     microarray gene expression markup language (MAGE-ML). Genome Biol.
     2002 Aug 23;3(9):RESEARCH0046.

_S_e_e _A_l_s_o:

     'importMAGEOM'

_E_x_a_m_p_l_e_s:

     data<-system.file("MAGEMLdata", package="RMAGEML")
     #To obtain a marrayInfo object containing the database identifiers of the features present on the array.#
     mageom<-importMAGEOM(directory=data)
     getGnames(mageom, DED="DED:707")

