getArrayDesign {MAGEML} | R Documentation

## Get arrayDesign object

### Description

This function parses the ArrayDesign package and returns an arrayDesign object.

### Usage

    getArrayDesign(file = "", datadir = "")

### Arguments

`file` | XML document containing the DesignElement package.
`datadir` | The directory where XML file resides.

### Value

List of three lists, called "location", "feature" and "zone".

### Author(s)

Joke Allemeersch, http://www.esat.kuleuven.ac.be/~jallemee
Steffen Durinck, http://www.esat.kuleuven.ac.be/~sdurinck.

### References

Spellman PT, Miller M, Stewart J, Troup C, Sarkans U, Chervitz S, Bernhart D, Sherlock G, Ball C, Lepage M, Swiatek M, Marks WL, Goncalves J, Markel S, Iordan D, Shojatalab M, Pizarro A, White J, Hubley R, Deutsch E, Senger M, Aronow BJ, Robinson A, Bassett D, Stoeckert CJ Jr and Brazma A. Design and implementation of microarray gene expression markup language (MAGE-ML). Genome Biol. 2002 Aug 23;3(9):RESEARCH0046.

### See Also

arrayDesign

### Examples

    data <- system.file("data", package="MAGEML")
    getArrayDesign(file="Iron.xml",datadir=data)

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