Package: HTqPCR
Type: Package
Title: Automated analysis of high-throughput qPCR data
Version: 1.2.0
Author: Heidi Dvinge, Paul Bertone
Maintainer: Heidi Dvinge <heidi@ebi.ac.uk>
Description: Analysis of Ct values from quantitative real-time PCR
        (qPCR) assays. Data can be analyzed in high throughput across
        multiple conditions or replicates, and in spatially-defined
        formats such ABI TaqMan Low Density Arrays and conventional 96-
        or 384-well plates. HTqPCR handles data loading, quality
        assessment, normalization, visualization and parametric or
        non-parametric testing for statistical significance in Ct
        values between features (e.g. genes, microRNAs).
Reference: Heidi Dvinge and Paul Bertone (2009). HTqPCR:
        High-throughput analysis and visualization of quantitative
        real-time PCR data in R Bioinformatics.
License: Artistic-2.0
URL: http://www.ebi.ac.uk/bertone/software
LazyLoad: yes
Depends: Biobase, RColorBrewer, limma
Suggests: statmod
Imports: affy, Biobase, gplots, graphics, grDevices, limma, methods,
        RColorBrewer, stats, utils
biocViews: MicrotitrePlateAssay, DifferentialExpression,
        GeneExpression, DataImport, QualityControl, Preprocessing,
        Bioinformatics, Visualization, MultipleComparisons
Packaged: 2010-04-23 01:35:24 UTC; biocbuild
Built: R 2.11.0; ; 2010-04-23 07:41:52 UTC; windows
