MethyLumi-class         The base class for storing Illumina Methylation
                        data
MethyLumiQC-class       Class to hold Illumina Methylation QC data
MethyLumiSet-class      Class to hold Illumina Methylation data
betas                   methylumi accessors
extractBarcodeAndPosition
                        Extract the Barcode and Position Information
                        from Sentrix ID
getAssayDataNameSubstitutions
                        Return a data.frame of AssayData name
                        substitutions.
methylumi-package       Handle Illumina methylation data
methylumiR              Load data from Illumina methylation platform
mldat                   Example SAM format Illumina methylation dataset
normalizeMethyLumiSet   Normalize a MethyLumiSet, accounting for dye
                        bias
plotSampleIntensities   Plot the sample intensities.
qcplot                  Methods for dealing with control data for
                        Illumina methylation data.
