Entry: AnalysisTreeSet-class
Aliases: AnalysisTreeSet-class AnalysisTreeSet filterTreeset,AnalysisTreeSet-method filterTreeset getTreeData,AnalysisTreeSet-method validData,AnalysisTreeSet-method validFilter,AnalysisTreeSet-method validFilter volcanoplot,AnalysisTreeSet-method
Keywords: classes
Description: Class AnalysisTreeSet
URL: ../../../library/xps/html/AnalysisTreeSet-class.html

Entry: CallTreeSet-class
Aliases: CallTreeSet-class CallTreeSet attachCall,CallTreeSet-method attachPVal,CallTreeSet-method callplot,CallTreeSet-method presCall,CallTreeSet-method presCall<-,CallTreeSet,data.frame-method pvalData,CallTreeSet-method pvalData<-,CallTreeSet,data.frame-method removeCall,CallTreeSet-method removePVal,CallTreeSet-method validCall,CallTreeSet-method validCall
Keywords: classes
Description: Class CallTreeSet
URL: ../../../library/xps/html/CallTreeSet-class.html

Entry: DataTreeSet-class
Aliases: DataTreeSet-class DataTreeSet addData,DataTreeSet-method attachBgrd,DataTreeSet-method attachInten,DataTreeSet-method attachMask,DataTreeSet-method background,DataTreeSet-method background background<-,DataTreeSet,data.frame-method background<- bgtreeNames,DataTreeSet-method bgtreeNames image,DataTreeSet-method intensity,DataTreeSet-method intensity<-,DataTreeSet,data.frame-method mm,DataTreeSet-method ncols,DataTreeSet-method nrows,DataTreeSet-method pm,DataTreeSet-method pmplot,DataTreeSet-method projectInfo,DataTreeSet-method projectInfo<-,DataTreeSet,ProjectInfo-method rawCELName,DataTreeSet-method removeBgrd,DataTreeSet-method removeInten,DataTreeSet-method removeMask,DataTreeSet-method validBgrd,DataTreeSet-method validBgrd validData,DataTreeSet-method xpsBgCorrect,DataTreeSet-method xpsDABGCall,DataTreeSet-method xpsINICall,DataTreeSet-method xpsMAS4,DataTreeSet-method xpsMAS5,DataTreeSet-method xpsMAS5Call,DataTreeSet-method xpsNormalize,DataTreeSet-method xpsPreprocess,DataTreeSet-method xpsRMA,DataTreeSet-method xpsSummarize,DataTreeSet-method
Keywords: classes
Description: Class DataTreeSet
URL: ../../../library/xps/html/DataTreeSet-class.html

Entry: ExprTreeSet-class
Aliases: ExprTreeSet-class ExprTreeSet attachExpr,ExprTreeSet-method exprType,ExprTreeSet-method exprType exprType<-,ExprTreeSet,character-method exprType<- exprs,ExprTreeSet-method exprs<-,ExprTreeSet,data.frame-method mvaplot,ExprTreeSet-method normType,ExprTreeSet-method normType normType<-,ExprTreeSet,character-method normType<- removeExpr,ExprTreeSet-method se.exprs,ExprTreeSet-method se.exprs xpsNormalize,ExprTreeSet-method xpsPreFilter,ExprTreeSet-method xpsUniFilter,ExprTreeSet-method
Keywords: classes
Description: Class ExprTreeSet
URL: ../../../library/xps/html/ExprTreeSet-class.html

Entry: Filter-class
Aliases: Filter-class numberFilters,Filter-method numberFilters
Keywords: classes
Description: Base Class Filter
URL: ../../../library/xps/html/Filter-class.html

Entry: FilterTreeSet-class
Aliases: FilterTreeSet-class FilterTreeSet callTreeset,FilterTreeSet-method callTreeset exprTreeset,FilterTreeSet-method exprTreeset getTreeData,FilterTreeSet-method validData,FilterTreeSet-method
Keywords: classes
Description: Class FilterTreeSet
URL: ../../../library/xps/html/FilterTreeSet-class.html

Entry: PreFilter-class
Aliases: PreFilter-class callFilter,PreFilter-method callFilter<-,PreFilter,character-method cvFilter,PreFilter-method cvFilter<-,PreFilter,numeric-method diffFilter,PreFilter-method diffFilter<-,PreFilter,numeric-method gapFilter,PreFilter-method gapFilter<-,PreFilter,numeric-method highFilter,PreFilter-method highFilter<-,PreFilter,character-method lowFilter,PreFilter-method lowFilter<-,PreFilter,character-method madFilter,PreFilter-method madFilter<-,PreFilter,numeric-method quantileFilter,PreFilter-method quantileFilter<-,PreFilter,numeric-method ratioFilter,PreFilter-method ratioFilter<-,PreFilter,numeric-method varFilter,PreFilter-method varFilter<-,PreFilter,numeric-method
Keywords: classes
Description: Class PreFilter
URL: ../../../library/xps/html/PreFilter-class.html

Entry: PreFilter-constructor
Aliases: PreFilter
Keywords: manip
Description: Constructor for Class PreFilter
URL: ../../../library/xps/html/PreFilter-constructor.html

Entry: ProcesSet-class
Aliases: ProcesSet-class ProcesSet boxplot,ProcesSet-method chipName,ProcesSet-method chipType,ProcesSet-method export,ProcesSet-method getTreeData,ProcesSet-method hist,ProcesSet-method mboxplot,ProcesSet-method schemeFile,ProcesSet-method schemeFile schemeFile<-,ProcesSet,character-method schemeFile<- schemeSet,ProcesSet-method schemeSet schemeSet<-,ProcesSet,SchemeTreeSet-method schemeSet<- validData,ProcesSet-method
Keywords: classes
Description: Class ProcesSet
URL: ../../../library/xps/html/ProcesSet-class.html

Entry: ProjectInfo-class
Aliases: ProjectInfo-class arrayInfo,ProjectInfo-method arrayInfo arrayInfo<-,ProjectInfo,character-method arrayInfo<- authorInfo,ProjectInfo-method authorInfo authorInfo<-,ProjectInfo,character-method authorInfo<- biopsyInfo,ProjectInfo-method biopsyInfo biopsyInfo<-,ProjectInfo,character-method biopsyInfo<- cellineInfo,ProjectInfo-method cellineInfo cellineInfo<-,ProjectInfo,character-method cellineInfo<- datasetInfo,ProjectInfo-method datasetInfo datasetInfo<-,ProjectInfo,character-method datasetInfo<- hybridizInfo,ProjectInfo-method hybridizInfo hybridizInfo<-,ProjectInfo,character-method hybridizInfo<- primcellInfo,ProjectInfo-method primcellInfo primcellInfo<-,ProjectInfo,character-method primcellInfo<- projectInfo,ProjectInfo-method projectInfo projectInfo<-,ProjectInfo,character-method projectInfo<- sampleInfo,ProjectInfo-method sampleInfo sampleInfo<-,ProjectInfo,character-method sampleInfo<- show,ProjectInfo-method sourceInfo,ProjectInfo-method sourceInfo sourceInfo<-,ProjectInfo,character-method sourceInfo<- tissueInfo,ProjectInfo-method tissueInfo tissueInfo<-,ProjectInfo,character-method tissueInfo<- treatmentInfo,ProjectInfo-method treatmentInfo treatmentInfo<-,ProjectInfo,character-method treatmentInfo<-
Keywords: classes
Description: Class ProjectInfo
URL: ../../../library/xps/html/ProjectInfo-class.html

Entry: ProjectInfo-constructor
Aliases: ProjectInfo
Keywords: manip
Description: Constructor for Class ProjectInfo
URL: ../../../library/xps/html/ProjectInfo-constructor.html

Entry: ROOT
Aliases: ROOT
Keywords: misc
Description: ROOT An Object-Oriented Data Analysis Framework
URL: ../../../library/xps/html/ROOT.html

Entry: SchemeTreeSet-class
Aliases: SchemeTreeSet-class SchemeTreeSet attachMask,SchemeTreeSet-method chipMask,SchemeTreeSet-method chipMask chipMask<-,SchemeTreeSet,data.frame-method chipMask<- chipName,SchemeTreeSet-method chipName chipType,SchemeTreeSet-method chipType chipType<-,SchemeTreeSet,character-method chipType<- export,SchemeTreeSet-method ncols,SchemeTreeSet-method ncols nrows,SchemeTreeSet-method nrows probeInfo,SchemeTreeSet-method probeInfo removeMask,SchemeTreeSet-method
Keywords: classes
Description: Class SchemeTreeSet
URL: ../../../library/xps/html/SchemeTreeSet-class.html

Entry: TreeSet-class
Aliases: TreeSet-class TreeSet export,TreeSet-method fileDir,TreeSet-method fileDir fileDir<-,TreeSet,character-method fileDir<- rootFile,TreeSet-method rootFile rootFile<-,TreeSet,character-method rootFile<- root.browser,TreeSet-method setName,TreeSet-method setName setName<-,TreeSet,character-method setName<- setType,TreeSet-method setType setType<-,TreeSet,character-method setType<- treeNames,TreeSet-method treeNames
Keywords: classes
Description: Class TreeSet
URL: ../../../library/xps/html/TreeSet-class.html

Entry: UniFilter-class
Aliases: UniFilter-class callFilter,UniFilter-method callFilter<-,UniFilter,character-method fcFilter,UniFilter-method fcFilter<-,UniFilter,character-method uniTest,UniFilter-method uniTest<-,UniFilter,character-method unitestFilter,UniFilter-method unitestFilter<-,UniFilter,character-method
Keywords: classes
Description: Class UniFilter
URL: ../../../library/xps/html/UniFilter-class.html

Entry: UniFilter-constructor
Aliases: UniFilter
Keywords: manip
Description: Constructor for Class UniFilter
URL: ../../../library/xps/html/UniFilter-constructor.html

Entry: addData-methods
Aliases: addData-methods addData
Keywords: methods
Description: Import additional CEL files into a DataTreeSet
URL: ../../../library/xps/html/addData-methods.html

Entry: attachBgrd-methods
Aliases: attachBgrd-methods attachBgrd removeBgrd-methods removeBgrd
Keywords: methods
Description: Attach/Remove Background Intensities
URL: ../../../library/xps/html/attachBgrd-methods.html

Entry: attachCall-methods
Aliases: attachCall-methods attachCall attachPVal-methods attachPVal removeCall-methods removeCall removePVal-methods removePVal
Keywords: methods
Description: Attach/Remove Detecion Call Measures
URL: ../../../library/xps/html/attachCall-methods.html

Entry: attachExpr-methods
Aliases: attachExpr-methods attachExpr removeExpr-methods removeExpr
Keywords: methods
Description: Attach/Remove Expression Measures
URL: ../../../library/xps/html/attachExpr-methods.html

Entry: attachInten-methods
Aliases: attachInten-methods attachInten removeInten-methods removeInten
Keywords: methods
Description: Attach/Remove Intensities
URL: ../../../library/xps/html/attachInten-methods.html

Entry: attachMask-methods
Aliases: attachMask-methods attachMask removeMask-methods removeMask
Keywords: methods
Description: Attach/Remove Scheme Mask
URL: ../../../library/xps/html/attachMask-methods.html

Entry: bgcorrect
Aliases: bgcorrect bgcorrect.gc bgcorrect.mas4 bgcorrect.mas5 bgcorrect.rma xpsBgCorrect-methods xpsBgCorrect
Keywords: manip
Description: Background Correction
URL: ../../../library/xps/html/bgcorrect.html

Entry: boxplot-methods
Aliases: boxplot-methods boxplot
Keywords: methods
Description: Box Plots
URL: ../../../library/xps/html/boxplot-methods.html

Entry: boxplot.dev
Aliases: boxplot.dev
Keywords: device
Description: Box Plots for Device
URL: ../../../library/xps/html/boxplot.dev.html

Entry: callFilter-methods
Aliases: callFilter-methods callFilter callFilter<-
Keywords: methods
Description: Detection Call Filter
URL: ../../../library/xps/html/callFilter-methods.html

Entry: callplot-methods
Aliases: callplot-methods callplot
Keywords: methods
Description: Barplot of Percent Present and Absent Calls.
URL: ../../../library/xps/html/callplot-methods.html

Entry: cvFilter-methods
Aliases: cvFilter-methods cvFilter cvFilter<-
Keywords: methods
Description: Coefficient of Variation Filter
URL: ../../../library/xps/html/cvFilter-methods.html

Entry: dabg.call
Aliases: dabg.call xpsDABGCall-methods xpsDABGCall
Keywords: manip
Description: Detection Above Background Call
URL: ../../../library/xps/html/dabg.call.html

Entry: dfw
Aliases: dfw
Keywords: manip
Description: Distribution Free Weighted Expression Measure
URL: ../../../library/xps/html/dfw.html

Entry: diffFilter-methods
Aliases: diffFilter-methods diffFilter diffFilter<-
Keywords: methods
Description: Difference Filter
URL: ../../../library/xps/html/diffFilter-methods.html

Entry: existsROOTFile
Aliases: existsROOTFile
Keywords: manip
Description: Test for Existing ROOT File
URL: ../../../library/xps/html/existsROOTFile.html

Entry: exonLevel
Aliases: exonLevel
Keywords: manip
Description: Conversion of Parameter exonlevel to Integer
URL: ../../../library/xps/html/exonLevel.html

Entry: export
Aliases: export.scheme export.data export.expr export.call export-methods export
Keywords: manip
Description: Export data as text files
URL: ../../../library/xps/html/export.html

Entry: export.filter
Aliases: export.filter
Keywords: manip
Description: Export filter data as text files
URL: ../../../library/xps/html/export.filter.html

Entry: export.root
Aliases: export.root
Keywords: manip
Description: Export data from ROOT file
URL: ../../../library/xps/html/export.root.html

Entry: express
Aliases: express xpsPreprocess-methods xpsPreprocess
Keywords: manip
Description: Compute expression levels from raw data
URL: ../../../library/xps/html/express.html

Entry: exprs-methods
Aliases: exprs-methods exprs exprs<-
Keywords: methods
Description: Get/Set Expression Values
URL: ../../../library/xps/html/exprs-methods.html

Entry: farms
Aliases: farms
Keywords: manip
Description: Factor Analysis for Robust Microarray Summarization Expression Measure
URL: ../../../library/xps/html/farms.html

Entry: fcFilter-methods
Aliases: fcFilter-methods fcFilter fcFilter<-
Keywords: methods
Description: Fold-Change Filter
URL: ../../../library/xps/html/fcFilter-methods.html

Entry: gapFilter-methods
Aliases: gapFilter-methods gapFilter gapFilter<-
Keywords: methods
Description: Gap Filter
URL: ../../../library/xps/html/gapFilter-methods.html

Entry: getChipName
Aliases: getChipName
Keywords: manip
Description: Get Chip Name
URL: ../../../library/xps/html/getChipName.html

Entry: getChipType
Aliases: getChipType
Keywords: manip
Description: Get Chip Type
URL: ../../../library/xps/html/getChipType.html

Entry: getDatatype
Aliases: getDatatype
Keywords: manip
Description: Get Data Type
URL: ../../../library/xps/html/getDatatype.html

Entry: getNameType
Aliases: getNameType
Keywords: manip
Description: Get Chip Name and Type
URL: ../../../library/xps/html/getNameType.html

Entry: getNumberTrees
Aliases: getNumberTrees
Keywords: manip
Description: Get Number of Trees
URL: ../../../library/xps/html/getNumberTrees.html

Entry: getProbeInfo
Aliases: getProbeInfo
Keywords: manip
Description: Get Probe Information
URL: ../../../library/xps/html/getProbeInfo.html

Entry: getTreeData-methods
Aliases: getTreeData-methods getTreeData
Keywords: methods
Description: Export Tree Data
URL: ../../../library/xps/html/getTreeData-methods.html

Entry: getTreeNames
Aliases: getTreeNames
Keywords: manip
Description: Get Tree Names
URL: ../../../library/xps/html/getTreeNames.html

Entry: highFilter-methods
Aliases: highFilter-methods highFilter highFilter<-
Keywords: methods
Description: Upper Threshold Filter
URL: ../../../library/xps/html/highFilter-methods.html

Entry: hist-methods
Aliases: hist-methods hist
Keywords: methods
Description: Density Estimate
URL: ../../../library/xps/html/hist-methods.html

Entry: image-methods
Aliases: image-methods image
Keywords: methods
Description: Display an Image
URL: ../../../library/xps/html/image-methods.html

Entry: image.dev
Aliases: image.dev
Keywords: device
Description: Image for Device
URL: ../../../library/xps/html/image.dev.html

Entry: import.data
Aliases: import.data
Keywords: manip
Description: Import CEL files into a DataTreeSet
URL: ../../../library/xps/html/import.data.html

Entry: import.exon.scheme
Aliases: import.exon.scheme
Keywords: manip
Description: Import CLF, PGF and annotation files into a SchemeTreeSet
URL: ../../../library/xps/html/import.exon.scheme.html

Entry: import.expr.scheme
Aliases: import.expr.scheme
Keywords: manip
Description: Import CDF, probe and annotation files into a SchemeTreeSet
URL: ../../../library/xps/html/import.expr.scheme.html

Entry: import.genome.scheme
Aliases: import.genome.scheme
Keywords: manip
Description: Import CLF, PGF and annotation files into a SchemeTreeSet
URL: ../../../library/xps/html/import.genome.scheme.html

Entry: ini.call
Aliases: ini.call xpsINICall-methods xpsINICall
Keywords: manip
Description: Informative/Non-Informative Call
URL: ../../../library/xps/html/ini.call.html

Entry: initialize-methods
Aliases: initialize,ProjectInfo-method initialize,TreeSet-method initialize,SchemeTreeSet-method initialize,ProcesSet-method initialize,DataTreeSet-method initialize,ExprTreeSet-method initialize,CallTreeSet-method initialize,Filter-method initialize,PreFilter-method initialize,UniFilter-method initialize,FilterTreeSet-method initialize,AnalysisTreeSet-method initialize-methods initialize
Keywords: methods
Description: Initialize Classes
URL: ../../../library/xps/html/initialize-methods.html

Entry: intensity-methods
Aliases: intensity-methods intensity intensity<-
Keywords: methods
Description: Get/Set Data Values
URL: ../../../library/xps/html/intensity-methods.html

Entry: isROOTFile
Aliases: isROOTFile
Keywords: manip
Description: Test for ROOT File
URL: ../../../library/xps/html/isROOTFile.html

Entry: lowFilter-methods
Aliases: lowFilter-methods lowFilter lowFilter<-
Keywords: methods
Description: Lower Threshold Filter
URL: ../../../library/xps/html/lowFilter-methods.html

Entry: madFilter-methods
Aliases: madFilter-methods madFilter madFilter<-
Keywords: methods
Description: Median Absolute Deviation Filter
URL: ../../../library/xps/html/madFilter-methods.html

Entry: mas4
Aliases: mas4 xpsMAS4-methods xpsMAS4
Keywords: manip
Description: MAS 4.0 Expression Measure
URL: ../../../library/xps/html/mas4.html

Entry: mas5
Aliases: mas5 xpsMAS5-methods xpsMAS5
Keywords: manip
Description: MAS 5.0 Expression Measure
URL: ../../../library/xps/html/mas5.html

Entry: mas5.call
Aliases: mas5.call xpsMAS5Call-methods xpsMAS5Call
Keywords: manip
Description: MAS 5.0 Absolute Detection Call
URL: ../../../library/xps/html/mas5.call.html

Entry: mboxplot-methods
Aliases: mboxplot-methods mboxplot
Keywords: methods
Description: Box Plots of Relative M Values
URL: ../../../library/xps/html/mboxplot-methods.html

Entry: metaProbesets
Aliases: metaProbesets
Keywords: manip
Description: Create MetaProbeset File for APT
URL: ../../../library/xps/html/metaProbesets.html

Entry: mvaplot-methods
Aliases: mvaplot-methods mvaplot
Keywords: methods
Description: M vs A Plot
URL: ../../../library/xps/html/mvaplot-methods.html

Entry: mvaplot.dev
Aliases: mvaplot.dev
Keywords: device
Description: MvA Scatter Plot for Device
URL: ../../../library/xps/html/mvaplot.dev.html

Entry: normalize
Aliases: normalize.constant normalize.lowess normalize.quantiles normalize.supsmu normalize xpsNormalize-methods xpsNormalize
Keywords: manip
Description: Normalization on Affymetrix Probe Level Data or on Expression Levels
URL: ../../../library/xps/html/normalize.html

Entry: pm-methods
Aliases: pm-methods mm-methods pm mm
Keywords: methods
Description: Methods for accessing perfect matches and mismatches
URL: ../../../library/xps/html/pm-methods.html

Entry: pmplot-methods
Aliases: pmplot-methods pmplot
Keywords: methods
Description: Barplot of PM and MM Intensities.
URL: ../../../library/xps/html/pmplot-methods.html

Entry: prefilter
Aliases: prefilter xpsPreFilter-methods xpsPreFilter
Keywords: manip
Description: Function for Applying a PreFilter to an ExprTreeSet
URL: ../../../library/xps/html/prefilter.html

Entry: presCall-methods
Aliases: presCall-methods presCall presCall<- pvalData-methods pvalData pvalData<-
Keywords: methods
Description: Get/Set Present Call Values
URL: ../../../library/xps/html/presCall-methods.html

Entry: quantileFilter-methods
Aliases: quantileFilter-methods quantileFilter quantileFilter<-
Keywords: methods
Description: Quantile Filter
URL: ../../../library/xps/html/quantileFilter-methods.html

Entry: ratioFilter-methods
Aliases: ratioFilter-methods ratioFilter ratioFilter<-
Keywords: methods
Description: Ratio Filter
URL: ../../../library/xps/html/ratioFilter-methods.html

Entry: rawCELName-methods
Aliases: rawCELName-methods rawCELName
Keywords: methods
Description: Method for getting names of the raw CEL-files
URL: ../../../library/xps/html/rawCELName-methods.html

Entry: rma
Aliases: rma xpsRMA-methods xpsRMA
Keywords: manip
Description: Robust Multi-Array Average Expression Measure
URL: ../../../library/xps/html/rma.html

Entry: root.browser-methods
Aliases: root.browser
Keywords: methods
Description: Open the ROOT object browser
URL: ../../../library/xps/html/root.browser-methods.html

Entry: root.call
Aliases: root.call
Keywords: manip
Description: Create class CallTreeSet accessing ROOT detection call file
URL: ../../../library/xps/html/root.call.html

Entry: root.data
Aliases: root.data
Keywords: manip
Description: Create class DataTreeSet accessing ROOT data file
URL: ../../../library/xps/html/root.data.html

Entry: root.density
Aliases: root.density
Keywords: device
Description: ROOT Density Plot
URL: ../../../library/xps/html/root.density.html

Entry: root.expr
Aliases: root.expr
Keywords: manip
Description: Create class ExprTreeSet accessing ROOT expression file
URL: ../../../library/xps/html/root.expr.html

Entry: root.graph1D
Aliases: root.graph1D
Keywords: device
Description: ROOT 1D-Graph
URL: ../../../library/xps/html/root.graph1D.html

Entry: root.graph2D
Aliases: root.graph2D
Keywords: device
Description: ROOT 2D-Graph
URL: ../../../library/xps/html/root.graph2D.html

Entry: root.hist1D
Aliases: root.hist1D
Keywords: device
Description: ROOT 1D-Histogram
URL: ../../../library/xps/html/root.hist1D.html

Entry: root.hist2D
Aliases: root.hist2D
Keywords: device
Description: ROOT 2D-Histogram
URL: ../../../library/xps/html/root.hist2D.html

Entry: root.hist3D
Aliases: root.hist3D
Keywords: device
Description: ROOT 3D-Histogram
URL: ../../../library/xps/html/root.hist3D.html

Entry: root.image
Aliases: root.image
Keywords: device
Description: ROOT Image
URL: ../../../library/xps/html/root.image.html

Entry: root.merge.data
Aliases: root.merge.data
Keywords: manip
Description: Create class DataTreeSet by merging ROOT data files
URL: ../../../library/xps/html/root.merge.data.html

Entry: root.mvaplot
Aliases: root.mvaplot
Keywords: device
Description: ROOT M vs A Plot
URL: ../../../library/xps/html/root.mvaplot.html

Entry: root.profile
Aliases: root.profile
Keywords: device
Description: ROOT Profile Plot
URL: ../../../library/xps/html/root.profile.html

Entry: root.scheme
Aliases: root.scheme
Keywords: manip
Description: Create class SchemeTreeSet accessing ROOT scheme file
URL: ../../../library/xps/html/root.scheme.html

Entry: summarize
Aliases: summarize summarize.mas4 summarize.mas5 summarize.rma xpsSummarize-methods xpsSummarize
Keywords: manip
Description: Probe Set Summarizing Functions
URL: ../../../library/xps/html/summarize.html

Entry: type2Exten
Aliases: type2Exten
Keywords: manip
Description: Convert Method Type to Tree Extension
URL: ../../../library/xps/html/type2Exten.html

Entry: uniTest-methods
Aliases: uniTest-methods uniTest uniTest<-
Keywords: methods
Description: A Two-Group Unitest
URL: ../../../library/xps/html/uniTest-methods.html

Entry: unifilter
Aliases: unifilter xpsUniFilter-methods xpsUniFilter
Keywords: manip
Description: Function for Applying an UniFilter to an ExprTreeSet
URL: ../../../library/xps/html/unifilter.html

Entry: unitestFilter-methods
Aliases: unitestFilter-methods unitestFilter unitestFilter<-
Keywords: methods
Description: Unitest Filter
URL: ../../../library/xps/html/unitestFilter-methods.html

Entry: validData-methods
Aliases: validData
Keywords: methods
Description: Extract Subset of Data
URL: ../../../library/xps/html/validData-methods.html

Entry: validTreetype
Aliases: validTreetype
Keywords: manip
Description: Validate Tree Type
URL: ../../../library/xps/html/validTreetype.html

Entry: varFilter-methods
Aliases: varFilter-methods varFilter varFilter<-
Keywords: methods
Description: Variance Filter
URL: ../../../library/xps/html/varFilter-methods.html

Entry: volcanoplot-methods
Aliases: volcanoplot-methods volcanoplot
Keywords: methods
Description: Volcano Plot
URL: ../../../library/xps/html/volcanoplot-methods.html

Entry: xps-package
Aliases: xps-package xps
Keywords: package
Description: xps Package Overview
URL: ../../../library/xps/html/xps-package.html

Entry: xpsOptions
Aliases: xpsOptions debug.xps
Keywords: manip
Description: xps Options
URL: ../../../library/xps/html/xpsOptions.html
