Entry: Chromosome14
Aliases: chr14 affy.cn affy.pos ill.cn ill.pos bac.cn bac.pos
Keywords: datasets
Description: Example data from several quantitative genomic methods
URL: ../../../library/quantsmooth/html/Chromosome14.html

Entry: drawSimpleChrom
Aliases: drawSimpleChrom
Keywords: aplot
Description: Draw chromosome-like icons
URL: ../../../library/quantsmooth/html/drawSimpleChrom.html

Entry: helperFunctions
Aliases: getChangedIdx
Keywords: internal
Description: arraysmooth Helper functions
URL: ../../../library/quantsmooth/html/getChangedIdx.html

Entry: getChangedRegions
Aliases: getChangedRegions
Keywords: attribute
Description: getChangedRegions
URL: ../../../library/quantsmooth/html/getChangedRegions.html

Entry: getLambdaMin
Aliases: getLambdaMin
Keywords: smooth
Description: getLambdaMin
URL: ../../../library/quantsmooth/html/getLambdaMin.html

Entry: grid.chromosome
Aliases: grid.chromosome
Keywords: aplot
Description: Draw a chromosome using the grid package
URL: ../../../library/quantsmooth/html/grid.chromosome.html

Entry: lengthChromosome
Aliases: lengthChromosome
Keywords: data
Description: Retrieve chromosomal length
URL: ../../../library/quantsmooth/html/lengthChromosome.html

Entry: numericCHR
Aliases: numericCHR characterCHR
Keywords: manip
Description: Conversion of chromosome IDs between numeric and character
URL: ../../../library/quantsmooth/html/numericCHR.html

Entry: paintCytobands
Aliases: paintCytobands
Keywords: aplot
Description: Paint a chromosomal idiogram
URL: ../../../library/quantsmooth/html/paintCytobands.html

Entry: plotChromosome
Aliases: plotChromosome
Keywords: hplot
Description: Wrapper for plotSmoothed
URL: ../../../library/quantsmooth/html/plotChromosome.html

Entry: plotSmoothed
Aliases: plotSmoothed
Keywords: hplot
Description: plotSmoothed
URL: ../../../library/quantsmooth/html/plotSmoothed.html

Entry: position2Cytoband
Aliases: position2Cytoband
Keywords: manip
Description: Determine cytoband position based on location of probe
URL: ../../../library/quantsmooth/html/position2Cytoband.html

Entry: prepareGenomePlot
Aliases: prepareGenomePlot
Keywords: hplot
Description: Set up a full genome plot
URL: ../../../library/quantsmooth/html/prepareGenomePlot.html

Entry: quantsmooth
Aliases: quantsmooth
Keywords: smooth
Description: quantsmooth
URL: ../../../library/quantsmooth/html/quantsmooth.html

Entry: quantsmooth.cv
Aliases: quantsmooth.cv
Keywords: htest smooth
Description: quantsmooth.cv
URL: ../../../library/quantsmooth/html/quantsmooth.cv.html

Entry: quantsmooth.seg
Aliases: quantsmooth.seg
Keywords: smooth
Description: quantsmooth.seg
URL: ../../../library/quantsmooth/html/quantsmooth.seg.html

Entry: scaleto
Aliases: scaleto
Keywords: manip
Description: Scales data within a range to a new range
URL: ../../../library/quantsmooth/html/scaleto.html
